Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16415

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,709,220	+		AO356_16410	0.59	+1.4
3,709,220	+		AO356_16410	0.59	+3.8
3,709,221	-		AO356_16410	0.59	-0.3
3,709,221	-		AO356_16410	0.59	+0.7
3,709,272	-		AO356_16410	0.62	+1.5
3,709,272	-		AO356_16410	0.62	+0.6
3,709,545	-		AO356_16410	0.74	-0.4
3,709,899	+				+1.5
3,709,899	+				-0.4
3,709,899	+				-0.2
3,709,900	-				-0.3
3,710,086	+				-0.9
3,710,087	-				+0.9
3,710,160	-				-0.6
3,710,219	+				+0.2
3,710,219	+				+0.6
3,710,220	-				-2.3
3,710,220	-				+0.7
3,710,241	-				+0.0
3,710,241	-				+0.2
3,710,241	-				-0.8
3,710,241	-				+0.7
3,710,241	-				+0.4
3,710,283	+				+0.4
3,710,283	+				-1.6
3,710,284	-				-1.4
3,710,284	-				+0.7
3,710,284	-				-0.4
3,710,316	+				+0.4
3,710,317	-				+1.4
3,710,317	-				+0.6
3,710,331	+				-0.2
3,710,348	+				+0.2
3,710,348	+				-1.1
3,710,349	-				-0.5
3,710,349	-				+1.2
3,710,384	+		AO356_16415	0.10	-0.5
3,710,384	+		AO356_16415	0.10	+0.8
3,710,384	+		AO356_16415	0.10	-1.2
3,710,384	+		AO356_16415	0.10	-3.2
3,710,385	-		AO356_16415	0.10	-1.0
3,710,610	+		AO356_16415	0.20	+0.1
3,710,610	+		AO356_16415	0.20	-0.8
3,710,610	+		AO356_16415	0.20	+2.3
3,710,610	+		AO356_16415	0.20	+1.0
3,710,610	+		AO356_16415	0.20	-1.3
3,710,610	+		AO356_16415	0.20	+1.2
3,710,610	+		AO356_16415	0.20	+0.5
3,710,610	+		AO356_16415	0.20	+1.2
3,710,611	-		AO356_16415	0.20	+0.5
3,710,611	-		AO356_16415	0.20	+2.4
3,710,611	-		AO356_16415	0.20	+1.0
3,710,611	-		AO356_16415	0.20	-2.2
3,710,611	-		AO356_16415	0.20	-0.8
3,710,611	-		AO356_16415	0.20	+1.5
3,710,611	-		AO356_16415	0.20	+1.6
3,710,612	+		AO356_16415	0.20	-0.7
3,710,654	+		AO356_16415	0.22	+1.2
3,710,654	+		AO356_16415	0.22	-1.7
3,710,654	+		AO356_16415	0.22	-0.7
3,710,654	+		AO356_16415	0.22	-0.6
3,710,655	-		AO356_16415	0.22	+0.4
3,710,655	-		AO356_16415	0.22	+0.2
3,710,711	+		AO356_16415	0.25	+1.1
3,710,711	+		AO356_16415	0.25	-2.0
3,710,712	-		AO356_16415	0.25	-0.0
3,710,738	+		AO356_16415	0.26	+1.7
3,710,738	+		AO356_16415	0.26	+1.5
3,710,738	+		AO356_16415	0.26	+0.3
3,710,739	-		AO356_16415	0.26	+1.7
3,710,739	-		AO356_16415	0.26	+1.9
3,710,739	-		AO356_16415	0.26	+1.2
3,710,768	+		AO356_16415	0.27	-0.0
3,710,769	-		AO356_16415	0.27	-0.3
3,710,769	-		AO356_16415	0.27	-1.4
3,710,769	-		AO356_16415	0.27	-2.5
3,710,854	-		AO356_16415	0.31	+0.1
3,710,854	-		AO356_16415	0.31	+1.1
3,710,937	-		AO356_16415	0.35	+0.3
3,710,970	+		AO356_16415	0.36	+1.2
3,710,970	+		AO356_16415	0.36	-1.4
3,710,971	-		AO356_16415	0.36	+0.3
3,710,985	+		AO356_16415	0.37	+0.4
3,710,985	+		AO356_16415	0.37	-0.8
3,710,985	+		AO356_16415	0.37	+0.4
3,710,986	-		AO356_16415	0.37	+2.0
3,710,986	-		AO356_16415	0.37	+0.5
3,710,986	-		AO356_16415	0.37	-0.9
3,710,986	-		AO356_16415	0.37	+0.9
3,710,986	-		AO356_16415	0.37	+0.9
3,710,986	-		AO356_16415	0.37	+0.5
3,711,069	+		AO356_16415	0.41	-1.3
3,711,069	+		AO356_16415	0.41	+0.8
3,711,070	-		AO356_16415	0.41	-0.8
3,711,099	+		AO356_16415	0.42	-0.7
3,711,099	+		AO356_16415	0.42	+0.8
3,711,100	-		AO356_16415	0.42	-2.5
3,711,100	-		AO356_16415	0.42	-0.2
3,711,253	+		AO356_16415	0.49	+0.7
3,711,253	+		AO356_16415	0.49	+0.3
3,711,253	+		AO356_16415	0.49	-0.8
3,711,254	-		AO356_16415	0.49	-0.2
3,711,548	+		AO356_16415	0.62	+0.8
3,711,549	-		AO356_16415	0.62	-1.3
3,711,720	+		AO356_16415	0.70	-1.0
3,711,720	+		AO356_16415	0.70	+0.3
3,711,720	+		AO356_16415	0.70	-2.0
3,711,720	+		AO356_16415	0.70	-1.6
3,711,720	+		AO356_16415	0.70	-1.3
3,711,720	+		AO356_16415	0.70	-0.9
3,711,720	+		AO356_16415	0.70	+0.8
3,711,720	+		AO356_16415	0.70	+0.0
3,711,720	+		AO356_16415	0.70	+1.4
3,711,720	+		AO356_16415	0.70	-3.1
3,711,721	-		AO356_16415	0.70	-0.4
3,711,721	-		AO356_16415	0.70	-0.7
3,711,721	-		AO356_16415	0.70	+1.8
3,711,721	-		AO356_16415	0.70	-2.1
3,711,721	-		AO356_16415	0.70	+0.5
3,711,721	-		AO356_16415	0.70	-0.5
3,711,721	-		AO356_16415	0.70	+0.7
3,711,721	-		AO356_16415	0.70	-0.5
3,711,721	-		AO356_16415	0.70	-0.3
3,711,721	-		AO356_16415	0.70	+0.9
3,711,721	-		AO356_16415	0.70	-2.5
3,711,721	-		AO356_16415	0.70	-0.4
3,711,721	-		AO356_16415	0.70	+2.0
3,711,721	-		AO356_16415	0.70	-0.5
3,711,740	+		AO356_16415	0.71	+1.9
3,711,741	-		AO356_16415	0.71	+0.1
3,711,789	+		AO356_16415	0.73	+0.5
3,711,789	+		AO356_16415	0.73	+1.1
3,711,789	+		AO356_16415	0.73	+1.3
3,711,789	+		AO356_16415	0.73	-0.5
3,711,789	+		AO356_16415	0.73	-0.7
3,711,790	-		AO356_16415	0.73	-1.3
3,711,790	-		AO356_16415	0.73	-0.6
3,711,790	-		AO356_16415	0.73	+3.9
3,711,816	-		AO356_16415	0.74	-0.1
3,711,927	+		AO356_16415	0.79	-1.5
3,711,928	-		AO356_16415	0.79	+0.5
3,711,928	-		AO356_16415	0.79	+0.7
3,711,928	-		AO356_16415	0.79	-0.4
3,711,928	-		AO356_16415	0.79	+1.0
3,712,017	+		AO356_16415	0.83	+0.5
3,712,017	+		AO356_16415	0.83	-1.0
3,712,017	+		AO356_16415	0.83	+1.0
3,712,018	-		AO356_16415	0.83	+0.3
3,712,018	-		AO356_16415	0.83	+2.1
3,712,018	-		AO356_16415	0.83	+0.8
3,712,018	-		AO356_16415	0.83	+2.0
3,712,018	-		AO356_16415	0.83	+0.1
3,712,018	-		AO356_16415	0.83	-1.0
3,712,018	-		AO356_16415	0.83	+0.2
3,712,074	+		AO356_16415	0.86	+1.3
3,712,074	+		AO356_16415	0.86	+2.0
3,712,074	+		AO356_16415	0.86	+1.0
3,712,075	-		AO356_16415	0.86	-0.3
3,712,075	-		AO356_16415	0.86	+1.8
3,712,107	+		AO356_16415	0.87	+2.3
3,712,107	+		AO356_16415	0.87	+1.3
3,712,107	+		AO356_16415	0.87	-1.3
3,712,107	+		AO356_16415	0.87	-3.5
3,712,107	+		AO356_16415	0.87	-0.8
3,712,108	-		AO356_16415	0.88	+0.7
3,712,167	+				-0.5
3,712,168	-				+1.0
3,712,168	-				+0.6
3,712,290	-				-1.9
3,712,314	+				+0.8
3,712,314	+				-0.4
3,712,315	-				+1.4
3,712,400	+				-0.6
3,712,401	-				+1.6
3,712,401	-				+0.5
3,712,401	-				-0.3
3,712,486	+				-0.3
3,712,508	+				-0.6
3,712,508	+				+1.5
3,712,508	+				-1.9
3,712,509	-				+0.4