Experiment: outer cut, LB soft agar motility assay
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10595 and AO356_10600 overlap by 4 nucleotides AO356_10600 and AO356_10605 are separated by 10 nucleotides
AO356_10595: AO356_10595 - mangotoxin biosynthesis-involved protein MgoB, at 2,410,804 to 2,411,580
_10595
AO356_10600: AO356_10600 - aminobenzoate oxygenase, at 2,411,577 to 2,412,509
_10600
AO356_10605: AO356_10605 - peptide transporter, at 2,412,520 to 2,416,086
_10605
Position (kb)
2411
2412
2413 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2410.644 kb on + strand at 2410.687 kb on + strand at 2410.697 kb on + strand at 2410.754 kb on + strand at 2410.903 kb on - strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.095 kb on + strand, within AO356_10595 at 2411.096 kb on - strand, within AO356_10595 at 2411.096 kb on - strand, within AO356_10595 at 2411.378 kb on - strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.380 kb on + strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.381 kb on - strand, within AO356_10595 at 2411.593 kb on - strand at 2411.593 kb on - strand at 2411.637 kb on - strand at 2411.769 kb on + strand, within AO356_10600 at 2411.769 kb on + strand, within AO356_10600 at 2411.910 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.208 kb on + strand, within AO356_10600 at 2412.209 kb on - strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.216 kb on + strand, within AO356_10600 at 2412.285 kb on + strand, within AO356_10600 at 2412.286 kb on - strand, within AO356_10600 at 2412.394 kb on - strand, within AO356_10600 at 2412.476 kb on - strand at 2412.495 kb on + strand at 2412.841 kb on - strand at 2413.123 kb on + strand, within AO356_10605 at 2413.124 kb on - strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.196 kb on + strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.197 kb on - strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.382 kb on + strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.383 kb on - strand, within AO356_10605 at 2413.385 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605 at 2413.424 kb on - strand, within AO356_10605
Per-strain Table
Position Strand Gene LocusTag Fraction outer cut, LB soft agar motility assay remove 2,410,644 + -2.0 2,410,687 + +0.5 2,410,697 + +0.5 2,410,754 + -0.9 2,410,903 - AO356_10595 0.13 -0.1 2,411,095 + AO356_10595 0.37 +0.4 2,411,095 + AO356_10595 0.37 -2.4 2,411,095 + AO356_10595 0.37 +0.1 2,411,095 + AO356_10595 0.37 +2.2 2,411,096 - AO356_10595 0.38 -1.6 2,411,096 - AO356_10595 0.38 +0.7 2,411,378 - AO356_10595 0.74 +1.0 2,411,380 + AO356_10595 0.74 -0.9 2,411,380 + AO356_10595 0.74 +1.4 2,411,380 + AO356_10595 0.74 +1.1 2,411,380 + AO356_10595 0.74 -0.1 2,411,380 + AO356_10595 0.74 +0.7 2,411,381 - AO356_10595 0.74 -0.4 2,411,381 - AO356_10595 0.74 -0.5 2,411,381 - AO356_10595 0.74 -2.7 2,411,593 - -0.2 2,411,593 - -1.4 2,411,637 - -1.1 2,411,769 + AO356_10600 0.21 -0.4 2,411,769 + AO356_10600 0.21 +1.0 2,411,910 + AO356_10600 0.36 +1.5 2,412,208 + AO356_10600 0.68 -1.1 2,412,208 + AO356_10600 0.68 +0.8 2,412,208 + AO356_10600 0.68 -1.5 2,412,208 + AO356_10600 0.68 +2.4 2,412,209 - AO356_10600 0.68 -1.0 2,412,216 + AO356_10600 0.68 -1.6 2,412,216 + AO356_10600 0.68 -0.9 2,412,285 + AO356_10600 0.76 +0.2 2,412,286 - AO356_10600 0.76 +1.4 2,412,394 - AO356_10600 0.88 -0.4 2,412,476 - +1.0 2,412,495 + +0.2 2,412,841 - +0.4 2,413,123 + AO356_10605 0.17 +0.8 2,413,124 - AO356_10605 0.17 -0.3 2,413,196 + AO356_10605 0.19 -0.6 2,413,196 + AO356_10605 0.19 +0.6 2,413,197 - AO356_10605 0.19 +1.5 2,413,197 - AO356_10605 0.19 +0.4 2,413,382 + AO356_10605 0.24 +1.2 2,413,382 + AO356_10605 0.24 -0.3 2,413,382 + AO356_10605 0.24 +2.3 2,413,382 + AO356_10605 0.24 +1.9 2,413,382 + AO356_10605 0.24 +0.2 2,413,382 + AO356_10605 0.24 -0.3 2,413,382 + AO356_10605 0.24 +1.1 2,413,382 + AO356_10605 0.24 +0.7 2,413,383 - AO356_10605 0.24 -1.0 2,413,383 - AO356_10605 0.24 +1.8 2,413,383 - AO356_10605 0.24 -0.5 2,413,383 - AO356_10605 0.24 +0.0 2,413,383 - AO356_10605 0.24 -2.1 2,413,383 - AO356_10605 0.24 +0.7 2,413,383 - AO356_10605 0.24 -0.1 2,413,383 - AO356_10605 0.24 +0.6 2,413,383 - AO356_10605 0.24 +0.9 2,413,383 - AO356_10605 0.24 +1.1 2,413,385 - AO356_10605 0.24 +1.4 2,413,424 - AO356_10605 0.25 -0.9 2,413,424 - AO356_10605 0.25 +0.0
Or see this region's nucleotide sequence