Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_08520

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,915,724	+		AO356_08515	0.23	+1.9
1,915,724	+		AO356_08515	0.23	-0.4
1,915,724	+		AO356_08515	0.23	-0.1
1,915,724	+		AO356_08515	0.23	+0.1
1,915,724	+		AO356_08515	0.23	+1.3
1,915,724	+		AO356_08515	0.23	-1.6
1,915,725	-		AO356_08515	0.23	+0.4
1,915,725	-		AO356_08515	0.23	-0.4
1,915,775	+		AO356_08515	0.29	+0.3
1,915,775	+		AO356_08515	0.29	+0.6
1,915,776	-		AO356_08515	0.29	-0.4
1,915,776	-		AO356_08515	0.29	+1.3
1,915,776	-		AO356_08515	0.29	+0.3
1,915,787	+		AO356_08515	0.30	-0.2
1,915,788	-		AO356_08515	0.30	-0.8
1,915,788	-		AO356_08515	0.30	+0.4
1,915,788	-		AO356_08515	0.30	-2.4
1,915,788	-		AO356_08515	0.30	-1.0
1,915,958	+		AO356_08515	0.49	+1.0
1,915,958	+		AO356_08515	0.49	+2.1
1,915,958	+		AO356_08515	0.49	+0.5
1,916,147	+		AO356_08515	0.70	+0.2
1,916,165	+		AO356_08515	0.72	-0.6
1,916,165	+		AO356_08515	0.72	+0.8
1,916,192	+		AO356_08515	0.75	+0.5
1,916,192	+		AO356_08515	0.75	+1.3
1,916,192	+		AO356_08515	0.75	+0.2
1,916,192	+		AO356_08515	0.75	-0.7
1,916,192	+		AO356_08515	0.75	-0.1
1,916,193	-		AO356_08515	0.75	+1.5
1,916,193	-		AO356_08515	0.75	+0.3
1,916,193	-		AO356_08515	0.75	-0.8
1,916,193	-		AO356_08515	0.75	+1.2
1,916,193	-		AO356_08515	0.75	+1.1
1,916,193	-		AO356_08515	0.75	-0.6
1,916,193	-		AO356_08515	0.75	+0.7
1,916,193	-		AO356_08515	0.75	+2.1
1,916,193	-		AO356_08515	0.75	+0.9
1,916,193	-		AO356_08515	0.75	-0.3
1,916,193	-		AO356_08515	0.75	+1.3
1,916,321	+		AO356_08515	0.89	+0.4
1,916,321	+		AO356_08515	0.89	+1.0
1,916,321	+		AO356_08515	0.89	-1.6
1,916,321	+		AO356_08515	0.89	-0.1
1,916,321	+		AO356_08515	0.89	-2.4
1,916,321	+		AO356_08515	0.89	-0.6
1,916,321	+		AO356_08515	0.89	+1.9
1,916,321	+		AO356_08515	0.89	-0.6
1,916,322	-		AO356_08515	0.89	+0.8
1,916,322	-		AO356_08515	0.89	-2.5
1,916,322	-		AO356_08515	0.89	-1.4
1,916,322	-		AO356_08515	0.89	-1.8
1,916,324	+		AO356_08515	0.89	-2.4
1,916,324	+		AO356_08515	0.89	-1.1
1,916,324	+		AO356_08515	0.89	-1.7
1,916,324	+		AO356_08515	0.89	-0.5
1,916,324	+		AO356_08515	0.89	-0.5
1,916,324	+		AO356_08515	0.89	+1.1
1,916,324	+		AO356_08515	0.89	-0.1
1,916,325	-		AO356_08515	0.89	+0.6
1,916,325	-		AO356_08515	0.89	-0.3
1,916,421	-				+1.4
1,916,542	+				+1.3
1,916,542	+				+0.5
1,916,543	-				-1.2
1,916,543	-				+1.2
1,916,543	-				+0.4
1,916,598	-				+0.2
1,916,598	-				-0.5
1,916,670	+				-0.2
1,916,670	+				+1.2
1,916,671	-				+0.8
1,916,684	+				-0.2
1,916,684	+				+0.3
1,916,684	+				-1.9
1,916,684	+				+1.0
1,916,684	+				+0.1
1,916,684	+				-1.1
1,916,685	-				-0.3
1,916,685	-				-1.0
1,916,685	-				-1.1
1,916,685	-				-0.5
1,916,685	-				+0.1
1,916,685	-				+0.7
1,916,685	-				+0.6
1,916,685	-				-0.6
1,916,685	-				-0.9
1,916,685	-				+1.4
1,916,685	-				+1.5
1,916,685	-				+0.2
1,916,685	-				+0.8
1,916,697	+				-0.1
1,916,697	+				+0.4
1,916,697	+				-0.5
1,916,697	+				-0.5
1,916,697	+				-0.2
1,916,698	-				-2.8
1,916,698	-				-0.2
1,916,728	+				-0.2
1,916,728	+				+1.1
1,916,729	-				-1.3
1,916,729	-				-0.3
1,916,764	+				-0.9
1,916,764	+				-0.4
1,916,764	+				-1.5
1,916,765	-				-1.7
1,916,824	+		AO356_08520	0.13	+0.3
1,916,825	-		AO356_08520	0.13	+0.3
1,916,904	+		AO356_08520	0.19	+0.6
1,916,904	+		AO356_08520	0.19	+0.9
1,916,905	-		AO356_08520	0.19	-0.7
1,916,905	-		AO356_08520	0.19	-0.2
1,916,905	-		AO356_08520	0.19	-1.4
1,916,905	-		AO356_08520	0.19	+1.3
1,916,966	-		AO356_08520	0.24	+0.5
1,916,966	-		AO356_08520	0.24	-1.0
1,916,966	-		AO356_08520	0.24	+1.2
1,917,127	+		AO356_08520	0.38	+1.6
1,917,128	-		AO356_08520	0.38	+0.8
1,917,128	-		AO356_08520	0.38	+0.2
1,917,289	-		AO356_08520	0.51	-3.0
1,917,629	+		AO356_08520	0.79	+0.3
1,917,629	+		AO356_08520	0.79	-0.5
1,917,630	-		AO356_08520	0.80	-0.3
1,917,630	-		AO356_08520	0.80	+0.2
1,917,630	-		AO356_08520	0.80	+1.3
1,917,630	-		AO356_08520	0.80	+1.7
1,917,630	-		AO356_08520	0.80	-0.4
1,917,750	+		AO356_08520	0.89	+0.2
1,917,750	+		AO356_08520	0.89	+1.1
1,917,751	-		AO356_08520	0.90	+0.9
1,917,751	-		AO356_08520	0.90	-0.2
1,917,838	+				+0.6
1,917,838	+				+2.5
1,917,839	-				+1.1
1,917,839	-				-0.4
1,917,839	-				-2.0
1,917,839	-				+0.7
1,917,839	-				+0.7
1,917,839	-				-0.5
1,917,860	+				-0.2
1,917,860	+				-0.1
1,917,861	-				-0.1
1,917,861	-				+1.8
1,917,861	-				-1.1
1,917,861	-				-1.4
1,917,861	-				+1.1
1,917,877	+				-0.7
1,917,877	+				-0.9
1,917,877	+				-1.9
1,917,877	+				-0.6
1,917,877	+				+1.3
1,917,877	+				+1.3
1,917,877	+				-2.1
1,917,878	-				-0.7
1,917,878	-				-0.5
1,917,878	-				+0.3
1,917,878	-				+0.2
1,917,910	+				+0.8
1,918,137	+		AO356_08525	0.29	-0.7
1,918,137	+		AO356_08525	0.29	+1.3
1,918,137	+		AO356_08525	0.29	-1.8
1,918,138	-		AO356_08525	0.29	-1.4
1,918,139	+		AO356_08525	0.29	-1.5
1,918,139	+		AO356_08525	0.29	-0.5
1,918,139	+		AO356_08525	0.29	-1.6
1,918,139	+		AO356_08525	0.29	-0.7
1,918,139	+		AO356_08525	0.29	-3.0
1,918,140	-		AO356_08525	0.29	+0.0
1,918,140	-		AO356_08525	0.29	+0.5
1,918,140	-		AO356_08525	0.29	-0.2
1,918,140	-		AO356_08525	0.29	+1.7
1,918,140	-		AO356_08525	0.29	-1.7
1,918,242	-		AO356_08525	0.41	-0.0
1,918,242	-		AO356_08525	0.41	-0.5
1,918,359	+		AO356_08525	0.55	-1.4
1,918,359	+		AO356_08525	0.55	-1.1
1,918,359	+		AO356_08525	0.55	-0.4
1,918,359	+		AO356_08525	0.55	+1.9
1,918,360	-		AO356_08525	0.56	-0.9
1,918,360	-		AO356_08525	0.56	-0.4
1,918,360	-		AO356_08525	0.56	+1.4
1,918,611	+		AO356_08525	0.86	-2.7
1,918,611	+		AO356_08525	0.86	+0.5
1,918,611	+		AO356_08525	0.86	-1.1
1,918,611	+		AO356_08525	0.86	-2.5
1,918,612	-		AO356_08525	0.86	-1.5
1,918,612	-		AO356_08525	0.86	+0.3
1,918,612	-		AO356_08525	0.86	+0.3
1,918,683	+				-1.2
1,918,683	+				-2.1
1,918,683	+				-1.7
1,918,683	+				-1.7
1,918,683	+				-0.6
1,918,857	-				-1.1