Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_04705

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,058,660	+		AO356_04695	0.46	+1.6
1,058,660	+		AO356_04695	0.46	+1.2
1,058,661	-		AO356_04695	0.47	-1.7
1,058,771	+		AO356_04695	0.59	-2.5
1,058,858	+		AO356_04695	0.69	+1.7
1,058,858	+		AO356_04695	0.69	+0.7
1,058,858	+		AO356_04695	0.69	+0.9
1,058,859	-		AO356_04695	0.69	-0.7
1,058,893	-		AO356_04695	0.73	+0.9
1,058,921	+		AO356_04695	0.76	-1.1
1,058,921	+		AO356_04695	0.76	-0.4
1,058,922	-		AO356_04695	0.76	+1.4
1,058,922	-		AO356_04695	0.76	+1.1
1,058,922	-		AO356_04695	0.76	+2.3
1,058,922	-		AO356_04695	0.76	-2.0
1,058,922	-		AO356_04695	0.76	-0.3
1,058,922	-		AO356_04695	0.76	+0.6
1,058,922	-		AO356_04695	0.76	-1.0
1,059,096	-				+0.3
1,059,101	+				-0.4
1,059,101	+				+0.0
1,059,101	+				+1.8
1,059,101	+				-0.5
1,059,101	+				+1.2
1,059,101	+				+1.9
1,059,101	+				-1.2
1,059,101	+				-0.2
1,059,102	-				-0.3
1,059,102	-				+0.5
1,059,102	-				+1.2
1,059,102	-				-2.3
1,059,102	-				+0.8
1,059,102	-				+0.5
1,059,113	+				+0.2
1,059,114	-				+2.7
1,059,127	+				-0.7
1,059,128	-				+0.1
1,059,128	-				-1.7
1,059,274	-				+1.0
1,059,303	+		AO356_04700	0.14	+0.9
1,059,303	+		AO356_04700	0.14	-0.6
1,059,303	+		AO356_04700	0.14	-0.1
1,059,303	+		AO356_04700	0.14	+0.9
1,059,303	+		AO356_04700	0.14	-0.7
1,059,303	+		AO356_04700	0.14	-0.0
1,059,303	+		AO356_04700	0.14	+0.2
1,059,304	-		AO356_04700	0.15	-1.5
1,059,304	-		AO356_04700	0.15	+0.9
1,059,304	-		AO356_04700	0.15	+0.0
1,059,304	-		AO356_04700	0.15	+0.8
1,059,304	-		AO356_04700	0.15	+1.9
1,059,304	-		AO356_04700	0.15	-0.5
1,059,304	-		AO356_04700	0.15	+0.3
1,059,304	-		AO356_04700	0.15	-0.7
1,059,304	-		AO356_04700	0.15	+0.9
1,059,304	-		AO356_04700	0.15	-0.1
1,059,304	-		AO356_04700	0.15	+1.0
1,059,305	+		AO356_04700	0.16	+0.7
1,059,306	-		AO356_04700	0.18	-1.0
1,059,314	+		AO356_04700	0.28	+0.2
1,059,315	-		AO356_04700	0.30	-0.0
1,059,315	-		AO356_04700	0.30	-1.7
1,059,390	-				-0.9
1,059,449	+				+0.2
1,059,481	+				+0.0
1,059,481	+				+1.0
1,059,481	+				+0.1
1,059,481	+				+0.8
1,059,482	-				-0.4
1,059,482	-				-2.2
1,059,482	-				+0.5
1,059,485	+				-1.6
1,059,485	+				-0.8
1,059,485	+				+1.1
1,059,485	+				-1.5
1,059,485	+				+0.5
1,059,485	+				+0.7
1,059,485	+				-0.1
1,059,486	-				-1.0
1,059,486	-				-0.1
1,059,486	-				-1.9
1,059,486	-				+0.5
1,059,501	+				+1.5
1,059,502	-				-1.4
1,059,502	-				+0.1
1,059,512	+				+0.8
1,059,513	-				+0.3
1,059,516	+				-1.3
1,059,516	+				+0.5
1,059,516	+				+0.1
1,059,516	+				+1.6
1,059,516	+				+0.0
1,059,517	-				+0.9
1,059,517	-				+2.1
1,059,517	-				+0.1
1,059,574	+				+1.3
1,059,617	-				-1.0
1,059,628	+				+0.6
1,059,628	+				+1.4
1,059,629	-				+0.4
1,059,671	+		AO356_04705	0.13	+0.5
1,059,671	+		AO356_04705	0.13	-0.7
1,059,671	+		AO356_04705	0.13	+1.2
1,059,671	+		AO356_04705	0.13	+1.1
1,059,671	+		AO356_04705	0.13	-0.1
1,059,671	+		AO356_04705	0.13	-0.3
1,059,672	-		AO356_04705	0.14	+0.8
1,059,672	-		AO356_04705	0.14	+0.5
1,059,672	-		AO356_04705	0.14	+1.0
1,059,672	-		AO356_04705	0.14	+1.3
1,059,672	-		AO356_04705	0.14	+0.8
1,059,672	-		AO356_04705	0.14	+0.7
1,059,715	+		AO356_04705	0.33	-0.0
1,059,716	-		AO356_04705	0.33	+1.0
1,059,716	-		AO356_04705	0.33	+0.3
1,059,767	+		AO356_04705	0.56	-0.9
1,059,767	+		AO356_04705	0.56	-1.8
1,059,767	+		AO356_04705	0.56	+1.8
1,059,768	-		AO356_04705	0.56	+0.9
1,059,768	-		AO356_04705	0.56	-1.0
1,059,768	-		AO356_04705	0.56	+0.1
1,059,870	+				+0.5
1,059,870	+				-0.8
1,059,870	+				+0.1
1,059,870	+				-1.6
1,059,870	+				-0.3
1,059,870	+				-2.6
1,059,870	+				+0.7
1,059,871	-				-1.9
1,059,871	-				-1.6
1,059,871	-				-1.6
1,059,871	-				-0.8
1,059,871	-				+0.8
1,059,871	-				+1.6
1,059,871	-				-0.1
1,059,874	+				-0.0
1,059,874	+				-2.1
1,059,874	+				+1.0
1,059,874	+				+1.1
1,059,875	-				-0.4
1,059,875	-				-0.6
1,059,875	-				-0.4
1,059,875	-				+0.4
1,059,946	-		AO356_04710	0.12	+1.1
1,059,946	-		AO356_04710	0.12	+1.3
1,059,956	-		AO356_04710	0.17	-2.7
1,059,979	+		AO356_04710	0.29	-0.3
1,059,980	-		AO356_04710	0.30	+0.2
1,059,987	-		AO356_04710	0.33	+1.3
1,060,018	-		AO356_04710	0.49	-0.6
1,060,032	+		AO356_04710	0.56	+0.4
1,060,075	+		AO356_04710	0.78	-0.8
1,060,075	+		AO356_04710	0.78	+1.1
1,060,075	+		AO356_04710	0.78	-2.0
1,060,075	+		AO356_04710	0.78	-1.1
1,060,075	+		AO356_04710	0.78	-2.4
1,060,076	-		AO356_04710	0.79	-0.3
1,060,076	-		AO356_04710	0.79	+0.9
1,060,090	+		AO356_04710	0.86	-2.5
1,060,095	+		AO356_04710	0.89	+0.4
1,060,136	+				+0.9
1,060,136	+				-2.3
1,060,150	-				+1.3
1,060,163	+				-0.9
1,060,164	-				-0.3
1,060,211	+				-0.7
1,060,211	+				+1.7
1,060,212	-				-0.5
1,060,220	+				-0.2
1,060,230	+				+0.9
1,060,230	+				-0.2
1,060,230	+				-0.3
1,060,230	+				-0.5
1,060,231	-				+0.5
1,060,231	-				-2.8
1,060,280	+				-2.1
1,060,302	+				+1.1
1,060,302	+				+0.3
1,060,320	+				-0.2
1,060,321	-				+1.5
1,060,355	+				-0.6
1,060,355	+				-0.6
1,060,356	-				+0.7
1,060,356	-				-1.2
1,060,356	-				+1.5
1,060,356	-				-0.1
1,060,360	+				-1.0
1,060,360	+				+0.0
1,060,360	+				+1.4
1,060,406	+				+0.7
1,060,407	-				-0.7
1,060,407	-				+1.4
1,060,407	-				+0.3
1,060,483	+				-1.1
1,060,483	+				-2.2
1,060,483	+				+0.1
1,060,483	+				-0.8
1,060,484	-				-1.9
1,060,484	-				-0.2
1,060,494	+				-0.3
1,060,494	+				+0.9
1,060,495	-				-1.1
1,060,495	-				+0.1
1,060,518	+				+0.2
1,060,579	+				-0.3
1,060,579	+				+0.2
1,060,579	+				-0.5
1,060,579	+				+0.7
1,060,580	-				+0.8
1,060,580	-				+2.2
1,060,580	-				-1.0
1,060,647	+		AO356_04715	0.12	-0.3
1,060,648	-		AO356_04715	0.12	+0.6
1,060,721	+		AO356_04715	0.27	-0.9
1,060,721	+		AO356_04715	0.27	-0.7
1,060,722	-		AO356_04715	0.27	+0.6
1,060,729	+		AO356_04715	0.29	+2.5
1,060,729	+		AO356_04715	0.29	+0.2
1,060,730	-		AO356_04715	0.29	+1.7