Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28730

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
6,253,016	+		AO353_28720	0.57	+2.9
6,253,016	+		AO353_28720	0.57	+1.1
6,253,017	-		AO353_28720	0.57	-0.5
6,253,017	-		AO353_28720	0.57	-0.7
6,253,017	-		AO353_28720	0.57	+1.1
6,253,017	-		AO353_28720	0.57	+0.1
6,253,025	+		AO353_28720	0.59	-1.8
6,253,025	+		AO353_28720	0.59	+0.4
6,253,025	+		AO353_28720	0.59	-2.4
6,253,025	+		AO353_28720	0.59	-1.3
6,253,026	-		AO353_28720	0.59	-0.6
6,253,026	-		AO353_28720	0.59	+1.2
6,253,028	+		AO353_28720	0.59	+0.9
6,253,028	+		AO353_28720	0.59	-0.1
6,253,028	+		AO353_28720	0.59	+1.2
6,253,029	-		AO353_28720	0.60	+0.6
6,253,029	-		AO353_28720	0.60	-1.1
6,253,029	-		AO353_28720	0.60	-0.5
6,253,029	-		AO353_28720	0.60	-3.0
6,253,029	-		AO353_28720	0.60	-2.4
6,253,102	+		AO353_28720	0.72	-0.3
6,253,102	+		AO353_28720	0.72	+1.7
6,253,103	-		AO353_28720	0.72	+2.7
6,253,139	+		AO353_28720	0.79	-0.5
6,253,139	+		AO353_28720	0.79	-0.7
6,253,139	+		AO353_28720	0.79	+1.2
6,253,140	-		AO353_28720	0.79	+0.9
6,253,140	-		AO353_28720	0.79	-1.2
6,253,140	-		AO353_28720	0.79	+0.1
6,253,142	+		AO353_28720	0.79	-1.8
6,253,143	-		AO353_28720	0.79	+1.0
6,253,143	-		AO353_28720	0.79	+0.3
6,253,143	-		AO353_28720	0.79	+1.9
6,253,143	-		AO353_28720	0.79	+2.1
6,253,143	-		AO353_28720	0.79	-1.3
6,253,143	-		AO353_28720	0.79	+1.0
6,253,143	-		AO353_28720	0.79	-1.5
6,253,143	-		AO353_28720	0.79	+0.1
6,253,143	-		AO353_28720	0.79	-1.2
6,253,145	+		AO353_28720	0.80	+0.0
6,253,146	-		AO353_28720	0.80	-2.2
6,253,259	+				+1.2
6,253,259	+				+1.1
6,253,259	+				-2.7
6,253,259	+				-0.7
6,253,260	-				+0.2
6,253,263	-				-1.3
6,253,297	-				+0.4
6,253,297	-				+2.1
6,253,297	-				+0.1
6,253,478	+				+0.7
6,253,531	+				+1.7
6,253,531	+				+0.1
6,253,531	+				+1.8
6,253,532	-				-2.1
6,253,532	-				+0.3
6,253,532	-				-0.8
6,253,532	-				+0.7
6,253,538	+				-0.2
6,253,541	+				-0.0
6,253,541	+				-2.5
6,253,541	+				-0.3
6,253,541	+				+3.1
6,253,541	+				+1.5
6,253,542	-				+0.4
6,253,542	-				-0.5
6,253,542	-				+0.8
6,253,542	-				-0.9
6,253,542	-				-1.1
6,253,605	-		AO353_28725	0.29	+1.2
6,253,610	+		AO353_28725	0.31	-1.9
6,253,611	-		AO353_28725	0.32	-0.1
6,253,611	-		AO353_28725	0.32	-0.3
6,253,677	-		AO353_28725	0.64	+0.4
6,253,689	+		AO353_28725	0.70	+0.8
6,253,689	+		AO353_28725	0.70	-2.1
6,253,690	-		AO353_28725	0.70	-1.9
6,253,750	-				+0.3
6,253,804	+				-0.9
6,253,804	+				+1.1
6,253,805	-				+0.7
6,253,805	-				+0.4
6,253,941	-				-1.3
6,253,967	-				+0.8
6,253,976	+				-0.4
6,253,977	-				+0.8
6,253,977	-				+1.8
6,253,977	-				-0.7
6,253,977	-				-1.8
6,253,977	-				+0.3
6,253,982	+				-1.9
6,253,982	+				+0.2
6,253,983	-				+0.5
6,253,983	-				-0.2
6,254,015	+				-0.5
6,254,015	+				-0.4
6,254,016	-				-0.9
6,254,139	+		AO353_28730	0.11	+0.6
6,254,354	+		AO353_28730	0.30	-0.5
6,254,355	-		AO353_28730	0.30	-0.8
6,254,414	+		AO353_28730	0.36	-0.7
6,254,414	+		AO353_28730	0.36	+1.4
6,254,414	+		AO353_28730	0.36	+2.3
6,254,415	-		AO353_28730	0.36	+0.4
6,254,510	-		AO353_28730	0.44	-2.7
6,254,545	-		AO353_28730	0.47	-0.8
6,254,634	-		AO353_28730	0.55	+0.7
6,254,634	-		AO353_28730	0.55	+0.7
6,254,634	-		AO353_28730	0.55	-1.5
6,254,788	-		AO353_28730	0.69	-1.1
6,254,827	-		AO353_28730	0.72	-3.3
6,254,827	-		AO353_28730	0.72	+0.5
6,254,922	+		AO353_28730	0.81	+1.8
6,254,922	+		AO353_28730	0.81	+0.1
6,254,922	+		AO353_28730	0.81	-0.3
6,254,922	+		AO353_28730	0.81	+3.7
6,254,922	+		AO353_28730	0.81	+0.4
6,254,922	+		AO353_28730	0.81	-1.7
6,254,922	+		AO353_28730	0.81	+0.5
6,254,922	+		AO353_28730	0.81	-2.3
6,254,922	+		AO353_28730	0.81	-0.6
6,254,923	-		AO353_28730	0.81	-0.8
6,254,923	-		AO353_28730	0.81	+1.1
6,254,923	-		AO353_28730	0.81	-0.2
6,255,015	+		AO353_28730	0.89	-0.5
6,255,015	+		AO353_28730	0.89	-0.8
6,255,016	-		AO353_28730	0.89	-0.9
6,255,016	-		AO353_28730	0.89	-0.5
6,255,043	+				+0.1
6,255,044	-				+1.2
6,255,142	+				-1.5
6,255,142	+				+0.1
6,255,142	+				+0.1
6,255,142	+				+0.3
6,255,142	+				+0.5
6,255,142	+				-2.0
6,255,142	+				-1.7
6,255,143	-				+0.4
6,255,143	-				-0.8
6,255,143	-				+0.9
6,255,247	+				+0.4
6,255,247	+				-0.5
6,255,247	+				-1.0
6,255,247	+				+1.1
6,255,247	+				+2.6
6,255,248	-				+1.1
6,255,265	+		AO353_28735	0.10	-2.2
6,255,265	+		AO353_28735	0.10	-2.0
6,255,265	+		AO353_28735	0.10	+2.7
6,255,265	+		AO353_28735	0.10	-3.0
6,255,265	+		AO353_28735	0.10	+0.1
6,255,265	+		AO353_28735	0.10	-0.3
6,255,266	-		AO353_28735	0.10	-0.1
6,255,266	-		AO353_28735	0.10	+2.3
6,255,266	-		AO353_28735	0.10	-1.7
6,255,266	-		AO353_28735	0.10	-1.8
6,255,266	-		AO353_28735	0.10	+1.1
6,255,266	-		AO353_28735	0.10	-1.1
6,255,281	+		AO353_28735	0.12	+0.9
6,255,392	+		AO353_28735	0.22	-1.8
6,255,400	+		AO353_28735	0.22	+0.7
6,255,401	-		AO353_28735	0.22	+1.8
6,255,476	-		AO353_28735	0.29	-2.0
6,255,476	-		AO353_28735	0.29	-0.3
6,255,531	-		AO353_28735	0.34	+1.9
6,255,541	+		AO353_28735	0.35	-0.7
6,255,542	-		AO353_28735	0.35	+2.6
6,255,610	+		AO353_28735	0.41	+0.7
6,255,610	+		AO353_28735	0.41	+0.4
6,255,610	+		AO353_28735	0.41	+2.9
6,255,611	-		AO353_28735	0.41	-1.3
6,255,611	-		AO353_28735	0.41	+0.1
6,255,611	-		AO353_28735	0.41	+0.8
6,255,611	-		AO353_28735	0.41	+0.4
6,255,688	+		AO353_28735	0.48	-1.1
6,255,688	+		AO353_28735	0.48	+0.2
6,255,688	+		AO353_28735	0.48	-0.1
6,255,688	+		AO353_28735	0.48	+1.0
6,255,689	-		AO353_28735	0.49	-3.0
6,255,689	-		AO353_28735	0.49	-0.3
6,255,792	-		AO353_28735	0.58	-1.1
6,255,838	+		AO353_28735	0.62	-0.9
6,255,838	+		AO353_28735	0.62	-0.9
6,255,838	+		AO353_28735	0.62	-0.3
6,255,838	+		AO353_28735	0.62	-0.9
6,255,838	+		AO353_28735	0.62	-0.7
6,255,838	+		AO353_28735	0.62	+0.7
6,255,839	-		AO353_28735	0.62	-0.9
6,255,839	-		AO353_28735	0.62	+2.2
6,255,839	-		AO353_28735	0.62	-0.5
6,255,839	-		AO353_28735	0.62	+0.4
6,255,839	-		AO353_28735	0.62	-1.1
6,255,839	-		AO353_28735	0.62	-1.1
6,255,839	-		AO353_28735	0.62	-0.3
6,255,863	+		AO353_28735	0.64	+0.2
6,255,863	+		AO353_28735	0.64	+0.7
6,255,863	+		AO353_28735	0.64	+0.7
6,255,863	+		AO353_28735	0.64	-0.1
6,255,863	+		AO353_28735	0.64	+0.7
6,255,863	+		AO353_28735	0.64	+1.1
6,255,863	+		AO353_28735	0.64	+0.3
6,255,864	-		AO353_28735	0.64	-0.3
6,255,864	-		AO353_28735	0.64	+0.4
6,255,866	-		AO353_28735	0.65	+2.0
6,255,866	-		AO353_28735	0.65	-2.5
6,255,895	+		AO353_28735	0.67	-0.1
6,255,895	+		AO353_28735	0.67	-1.4
6,255,895	+		AO353_28735	0.67	-0.5
6,255,895	+		AO353_28735	0.67	+1.1
6,255,895	+		AO353_28735	0.67	+0.6
6,255,895	+		AO353_28735	0.67	+0.7
6,255,896	-		AO353_28735	0.67	-1.1
6,255,896	-		AO353_28735	0.67	-0.4
6,255,896	-		AO353_28735	0.67	-0.8
6,255,896	-		AO353_28735	0.67	-0.7
6,255,896	-		AO353_28735	0.67	-1.7
6,255,896	-		AO353_28735	0.67	-0.9
6,256,087	+		AO353_28735	0.85	-0.2
6,256,087	+		AO353_28735	0.85	-0.3
6,256,087	+		AO353_28735	0.85	-0.6
6,256,087	+		AO353_28735	0.85	+0.4
6,256,087	+		AO353_28735	0.85	-1.1
6,256,087	+		AO353_28735	0.85	-0.6
6,256,087	+		AO353_28735	0.85	+0.8
6,256,087	+		AO353_28735	0.85	+0.4
6,256,087	+		AO353_28735	0.85	-1.1
6,256,087	+		AO353_28735	0.85	-0.8
6,256,088	-		AO353_28735	0.85	+0.7
6,256,088	-		AO353_28735	0.85	+1.0
6,256,088	-		AO353_28735	0.85	-0.3
6,256,088	-		AO353_28735	0.85	+2.1
6,256,088	-		AO353_28735	0.85	+2.4
6,256,088	-		AO353_28735	0.85	-1.1
6,256,088	-				-0.9
6,256,088	-		AO353_28735	0.85	-0.9
6,256,088	-		AO353_28735	0.85	+2.0
6,256,088	-		AO353_28735	0.85	+1.0
6,256,088	-		AO353_28735	0.85	+1.1
6,256,088	-		AO353_28735	0.85	-0.7