Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21460

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
4,692,951	+		AO353_21445	0.69	-2.1
4,692,951	+		AO353_21445	0.69	-1.8
4,692,951	+		AO353_21445	0.69	-2.7
4,692,951	+		AO353_21445	0.69	-3.3
4,692,951	+		AO353_21445	0.69	-0.7
4,692,952	-		AO353_21445	0.69	-2.9
4,693,154	+		AO353_21450	0.33	-0.5
4,693,154	+		AO353_21450	0.33	-1.7
4,693,154	+		AO353_21450	0.33	-0.1
4,693,154	+		AO353_21450	0.33	-2.6
4,693,154	+		AO353_21450	0.33	-2.2
4,693,154	+		AO353_21450	0.33	-1.8
4,693,154	+		AO353_21450	0.33	-3.0
4,693,155	-		AO353_21450	0.33	-1.1
4,693,155	-		AO353_21450	0.33	-1.9
4,693,155	-		AO353_21450	0.33	-3.7
4,693,155	-		AO353_21450	0.33	+0.7
4,693,170	-		AO353_21450	0.38	+0.9
4,693,209	+		AO353_21450	0.52	-1.1
4,693,211	+		AO353_21450	0.53	-3.1
4,693,211	+		AO353_21450	0.53	-1.1
4,693,211	+		AO353_21450	0.53	-1.5
4,693,211	+		AO353_21450	0.53	-1.1
4,693,211	+		AO353_21450	0.53	-2.1
4,693,211	+		AO353_21450	0.53	-1.3
4,693,211	+		AO353_21450	0.53	+0.3
4,693,211	+		AO353_21450	0.53	-2.7
4,693,211	+		AO353_21450	0.53	-2.2
4,693,211	+		AO353_21450	0.53	-1.0
4,693,211	+		AO353_21450	0.53	-1.2
4,693,212	-		AO353_21450	0.53	-2.1
4,693,212	-		AO353_21450	0.53	-1.1
4,693,212	-		AO353_21450	0.53	-3.3
4,693,212	-		AO353_21450	0.53	-2.1
4,693,212	-		AO353_21450	0.53	-2.7
4,693,212	-		AO353_21450	0.53	-2.7
4,693,212	-		AO353_21450	0.53	-2.4
4,693,212	-		AO353_21450	0.53	-1.6
4,693,217	+		AO353_21450	0.55	-4.0
4,693,217	+		AO353_21450	0.55	-2.3
4,693,218	-		AO353_21450	0.56	-2.5
4,693,218	-		AO353_21450	0.56	-2.7
4,693,218	-		AO353_21450	0.56	+0.7
4,693,218	-		AO353_21450	0.56	+1.4
4,693,369	+				-1.1
4,693,369	+				-0.5
4,693,369	+				-3.4
4,693,369	+				-0.9
4,693,369	+				-0.9
4,693,369	+				-0.3
4,693,369	+				-2.7
4,693,369	+				-0.4
4,693,369	+				-0.1
4,693,370	-				-2.0
4,693,370	-				-2.0
4,693,370	-				-1.9
4,693,370	-				+1.1
4,693,370	-				-2.0
4,693,370	-				-1.5
4,693,667	+		AO353_21455	0.67	-1.8
4,693,734	+		AO353_21455	0.81	+0.7
4,693,735	-		AO353_21455	0.81	-0.9
4,693,735	-		AO353_21455	0.81	-0.7
4,693,899	+				-0.2
4,693,899	+				+0.4
4,693,899	+				-2.0
4,693,899	+				-1.3
4,693,899	+				+0.7
4,693,899	+				+0.1
4,693,899	+				-0.9
4,693,899	+				-1.8
4,693,899	+				-0.9
4,693,900	-				-0.3
4,693,900	-				-0.7
4,693,900	-				-1.8
4,693,900	-				+0.5
4,693,900	-				-1.5
4,693,976	+				-2.4
4,693,976	+				-1.1
4,693,976	+				-1.3
4,693,976	+				-2.7
4,693,976	+				-4.0
4,693,976	+				-0.7
4,693,977	-				-2.5
4,693,977	-				+0.2
4,693,977	-				-2.0
4,693,977	-				-0.4
4,694,198	-		AO353_21460	0.22	-1.7
4,694,490	+		AO353_21460	0.40	-0.0
4,694,490	+		AO353_21460	0.40	+1.7
4,694,490	+		AO353_21460	0.40	-2.0
4,694,490	+		AO353_21460	0.40	-2.4
4,694,490	+		AO353_21460	0.40	-2.5
4,694,490	+		AO353_21460	0.40	-1.0
4,694,491	-		AO353_21460	0.40	-0.9
4,694,626	+		AO353_21460	0.48	+0.7
4,694,626	+		AO353_21460	0.48	-1.3
4,694,626	+		AO353_21460	0.48	-1.3
4,694,626	+		AO353_21460	0.48	-1.3
4,694,627	-		AO353_21460	0.48	-0.3
4,694,627	-		AO353_21460	0.48	-2.5
4,694,627	-		AO353_21460	0.48	+0.0
4,694,627	-		AO353_21460	0.48	-1.1
4,694,627	-		AO353_21460	0.48	-1.1
4,694,647	-		AO353_21460	0.49	-0.7
4,694,647	-		AO353_21460	0.49	-3.3
4,694,647	-		AO353_21460	0.49	-1.7
4,694,670	+		AO353_21460	0.50	-2.8
4,694,670	+		AO353_21460	0.50	-2.1
4,694,671	-		AO353_21460	0.50	-2.6
4,694,727	+		AO353_21460	0.54	+1.3
4,694,727	+		AO353_21460	0.54	-1.5
4,694,728	-		AO353_21460	0.54	-0.7
4,694,728	-		AO353_21460	0.54	-2.3
4,694,728	-		AO353_21460	0.54	+1.7
4,694,787	+		AO353_21460	0.57	+0.2
4,694,787	+		AO353_21460	0.57	-2.9
4,694,788	-		AO353_21460	0.57	-2.3
4,694,949	+		AO353_21460	0.67	-1.1
4,694,949	+		AO353_21460	0.67	-2.3
4,694,950	-		AO353_21460	0.67	-1.8
4,694,950	-		AO353_21460	0.67	-2.6
4,694,950	-		AO353_21460	0.67	-1.1
4,694,950	-		AO353_21460	0.67	-0.3
4,694,950	-		AO353_21460	0.67	-2.8
4,694,950	-		AO353_21460	0.67	-2.7
4,694,950	-		AO353_21460	0.67	-2.1
4,694,950	-		AO353_21460	0.67	-2.7
4,694,950	-		AO353_21460	0.67	-2.5
4,695,006	+		AO353_21460	0.70	-0.7
4,695,006	+		AO353_21460	0.70	-1.7
4,695,006	+		AO353_21460	0.70	-1.9
4,695,006	+		AO353_21460	0.70	-2.4
4,695,006	+		AO353_21460	0.70	+1.8
4,695,006	+		AO353_21460	0.70	+0.1
4,695,007	-		AO353_21460	0.70	-1.3
4,695,007	-		AO353_21460	0.70	-0.7
4,695,007	-		AO353_21460	0.70	-0.7
4,695,007	-		AO353_21460	0.70	-2.3
4,695,007	-		AO353_21460	0.70	-0.7
4,695,060	+		AO353_21460	0.73	-1.5
4,695,061	-		AO353_21460	0.73	-1.3
4,695,129	+		AO353_21460	0.77	-2.9
4,695,362	+				-1.9
4,695,475	+				-3.1
4,695,475	+				-2.3
4,695,475	+				-2.1
4,695,476	-				-1.8
4,695,476	-				+0.3
4,695,476	-				-0.3
4,695,476	-				-2.2
4,695,619	+		AO353_21465	0.33	+0.4
4,695,619	+		AO353_21465	0.33	-0.9
4,695,647	+		AO353_21465	0.41	-2.0
4,695,647	+		AO353_21465	0.41	-2.3
4,695,647	+		AO353_21465	0.41	-1.0
4,695,879	-				+1.1
4,695,879	-				-1.3
4,695,951	+				+1.2
4,695,951	+				-0.7
4,695,952	-				-4.4
4,695,964	+				-2.2
4,695,964	+				-2.7
4,695,964	+				-1.5
4,695,964	+				-3.7
4,695,965	-				+0.8
4,695,965	-				-0.4
4,695,965	-				-1.5
4,695,998	+				-1.5
4,695,999	-				-1.9
4,696,174	+		AO353_21470	0.11	-1.9
4,696,174	+		AO353_21470	0.11	-2.5
4,696,174	+		AO353_21470	0.11	+0.5
4,696,174	+		AO353_21470	0.11	-2.9
4,696,174	+		AO353_21470	0.11	+0.8
4,696,174	+		AO353_21470	0.11	-2.1
4,696,174	+		AO353_21470	0.11	+1.0
4,696,174	+		AO353_21470	0.11	-2.5
4,696,174	+		AO353_21470	0.11	+0.4
4,696,174	+		AO353_21470	0.11	-3.4
4,696,174	+		AO353_21470	0.11	-1.7
4,696,174	+		AO353_21470	0.11	-1.1
4,696,174	+		AO353_21470	0.11	-2.7
4,696,174	+		AO353_21470	0.11	-0.5
4,696,175	-		AO353_21470	0.11	+0.9
4,696,175	-		AO353_21470	0.11	+0.7
4,696,175	-		AO353_21470	0.11	-3.8
4,696,175	-		AO353_21470	0.11	-2.1
4,696,175	-		AO353_21470	0.11	-1.9
4,696,175	-		AO353_21470	0.11	-1.3
4,696,175	-		AO353_21470	0.11	-1.6
4,696,255	+		AO353_21470	0.14	-2.0
4,696,255	+		AO353_21470	0.14	-1.3
4,696,255	+		AO353_21470	0.14	+1.5
4,696,255	+		AO353_21470	0.14	-2.7
4,696,256	-		AO353_21470	0.14	-1.9
4,696,256	-		AO353_21470	0.14	-1.1
4,696,284	+		AO353_21470	0.15	+0.7
4,696,401	+		AO353_21470	0.19	-3.2