Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15570

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,445,142	+				-1.8
3,445,143	-				+1.2
3,445,143	-				-2.6
3,445,158	+				-2.6
3,445,159	-				+1.0
3,445,274	+		AO353_15565	0.17	-1.5
3,445,274	+		AO353_15565	0.17	-0.4
3,445,274	+		AO353_15565	0.17	-2.0
3,445,275	-		AO353_15565	0.17	-0.1
3,445,275	-		AO353_15565	0.17	-2.3
3,445,295	+		AO353_15565	0.19	+0.4
3,445,295	+		AO353_15565	0.19	-0.7
3,445,296	-		AO353_15565	0.19	+1.3
3,445,373	-		AO353_15565	0.29	+0.3
3,445,432	-		AO353_15565	0.36	+2.3
3,445,432	-		AO353_15565	0.36	-0.9
3,445,469	+		AO353_15565	0.41	+1.9
3,445,469	+		AO353_15565	0.41	-2.0
3,445,505	+		AO353_15565	0.45	+2.0
3,445,505	+		AO353_15565	0.45	+1.3
3,445,787	-		AO353_15565	0.80	+0.3
3,445,835	-		AO353_15565	0.86	+1.1
3,445,835	-		AO353_15565	0.86	+1.0
3,445,835	-		AO353_15565	0.86	-2.8
3,445,971	+				+0.5
3,446,002	+				-2.0
3,446,002	+				+0.3
3,446,002	+				+0.2
3,446,003	-				-0.7
3,446,003	-				+2.6
3,446,003	-				-0.9
3,446,003	-				+0.7
3,446,003	-				+0.8
3,446,021	+				+0.9
3,446,022	-				-1.1
3,446,022	-				-1.1
3,446,029	-				+0.5
3,446,029	-				+0.6
3,446,029	-				-0.5
3,446,037	+				-2.1
3,446,038	-				-0.5
3,446,054	-				+0.6
3,446,054	-				+0.9
3,446,090	+				+1.1
3,446,090	+				-0.1
3,446,090	+				+0.3
3,446,090	+				+1.5
3,446,091	-				-1.4
3,446,091	-				+1.5
3,446,091	-				+0.2
3,446,091	-				+1.3
3,446,091	-				+0.4
3,446,091	-				+0.1
3,446,091	-				+0.8
3,446,091	-				+2.8
3,446,091	-				-0.9
3,446,091	-				+2.9
3,446,093	-				+0.4
3,446,102	+				+0.0
3,446,102	+				-0.2
3,446,102	+				+0.5
3,446,103	-				+2.3
3,446,126	-				-0.2
3,446,126	-				+1.2
3,446,126	-				-0.0
3,446,126	-				+0.4
3,446,255	+		AO353_15570	0.12	-0.0
3,446,321	+		AO353_15570	0.19	-0.8
3,446,321	+		AO353_15570	0.19	-0.7
3,446,321	+		AO353_15570	0.19	+0.2
3,446,321	+		AO353_15570	0.19	+0.0
3,446,321	+		AO353_15570	0.19	+1.5
3,446,321	+		AO353_15570	0.19	+0.1
3,446,321	+		AO353_15570	0.19	-0.1
3,446,321	+		AO353_15570	0.19	+2.0
3,446,321	+		AO353_15570	0.19	-1.8
3,446,321	+		AO353_15570	0.19	-0.9
3,446,322	-		AO353_15570	0.19	+1.2
3,446,322	-		AO353_15570	0.19	+0.2
3,446,322	-		AO353_15570	0.19	+1.0
3,446,322	-		AO353_15570	0.19	+3.1
3,446,322	-		AO353_15570	0.19	+1.6
3,446,450	+		AO353_15570	0.31	+0.2
3,446,451	-		AO353_15570	0.32	-0.4
3,446,473	+		AO353_15570	0.34	-1.7
3,446,474	-		AO353_15570	0.34	-0.1
3,446,474	-		AO353_15570	0.34	-1.1
3,446,474	-		AO353_15570	0.34	+1.2
3,446,736	+		AO353_15570	0.60	+1.5
3,446,736	+		AO353_15570	0.60	+2.0
3,446,736	+		AO353_15570	0.60	+1.1
3,446,736	+		AO353_15570	0.60	-1.2
3,446,736	+		AO353_15570	0.60	+1.2
3,446,736	+		AO353_15570	0.60	-0.3
3,446,736	+		AO353_15570	0.60	+2.2
3,446,736	+		AO353_15570	0.60	+0.2
3,446,736	+		AO353_15570	0.60	+1.3
3,446,737	-		AO353_15570	0.60	+1.6
3,446,737	-		AO353_15570	0.60	-0.4
3,446,737	-		AO353_15570	0.60	-0.1
3,446,737	-		AO353_15570	0.60	-0.2
3,446,737	-		AO353_15570	0.60	-1.9
3,446,949	-		AO353_15570	0.80	-0.8
3,446,949	-		AO353_15570	0.80	+2.3
3,446,960	+		AO353_15570	0.81	-2.8
3,446,960	+		AO353_15570	0.81	+0.1
3,446,960	+		AO353_15570	0.81	-1.5
3,446,960	+		AO353_15570	0.81	-0.1
3,446,960	+		AO353_15570	0.81	+0.1
3,446,960	+		AO353_15570	0.81	-0.5
3,446,961	-		AO353_15570	0.82	+1.1
3,446,961	-		AO353_15570	0.82	-2.4
3,446,987	+		AO353_15570	0.84	+2.1
3,446,987	+		AO353_15570	0.84	+2.7
3,446,987	+		AO353_15570	0.84	+0.4
3,446,987	+		AO353_15570	0.84	+0.8
3,446,987	+		AO353_15570	0.84	-1.7
3,446,987	+		AO353_15570	0.84	-0.9
3,446,987	+		AO353_15570	0.84	+0.8
3,446,987	+		AO353_15570	0.84	+0.2
3,446,987	+		AO353_15570	0.84	-0.8
3,446,987	+		AO353_15570	0.84	-0.2
3,446,987	+		AO353_15570	0.84	-1.5
3,446,987	+		AO353_15570	0.84	-2.0
3,446,987	+		AO353_15570	0.84	+1.7
3,446,987	+		AO353_15570	0.84	-0.7
3,446,987	+		AO353_15570	0.84	+0.1
3,446,987	+		AO353_15570	0.84	-1.7
3,446,987	+		AO353_15570	0.84	+1.2
3,446,987	+		AO353_15570	0.84	-1.9
3,446,987	+		AO353_15570	0.84	+0.5
3,446,988	-		AO353_15570	0.84	+1.6
3,446,988	-		AO353_15570	0.84	+1.9
3,446,988	-		AO353_15570	0.84	+2.9
3,446,988	-		AO353_15570	0.84	+0.3
3,446,988	-		AO353_15570	0.84	+2.2
3,446,988	-		AO353_15570	0.84	-2.9
3,446,988	-		AO353_15570	0.84	-1.2
3,446,988	-		AO353_15570	0.84	-0.7
3,446,988	-		AO353_15570	0.84	-1.1
3,446,988	-		AO353_15570	0.84	-0.2
3,446,991	+		AO353_15570	0.85	-1.6
3,446,991	+		AO353_15570	0.85	-1.2
3,446,991	+		AO353_15570	0.85	+0.7
3,446,991	+		AO353_15570	0.85	-2.1
3,446,991	+		AO353_15570	0.85	-0.2
3,446,991	+		AO353_15570	0.85	+0.8
3,446,991	+		AO353_15570	0.85	+3.5
3,446,992	-		AO353_15570	0.85	+2.1
3,447,259	-				+0.7
3,447,277	+				+2.1
3,447,277	+				+2.3
3,447,278	-				+0.6
3,447,278	-				+1.7
3,447,278	-				+1.3
3,447,279	+				-1.6
3,447,291	-				+0.2
3,447,291	-				-1.2
3,447,436	+		AO353_15575	0.17	-2.4
3,447,436	+		AO353_15575	0.17	+0.8
3,447,436	+		AO353_15575	0.17	-0.9
3,447,436	+		AO353_15575	0.17	+1.2
3,447,436	+		AO353_15575	0.17	-0.5
3,447,436	+		AO353_15575	0.17	-0.9
3,447,436	+		AO353_15575	0.17	+1.7
3,447,436	+		AO353_15575	0.17	-0.2
3,447,436	+		AO353_15575	0.17	-0.5
3,447,437	-		AO353_15575	0.17	+0.5
3,447,437	-		AO353_15575	0.17	+0.2
3,447,437	-		AO353_15575	0.17	+1.0
3,447,437	-		AO353_15575	0.17	+0.2
3,447,514	+		AO353_15575	0.24	-0.2
3,447,574	+		AO353_15575	0.30	-2.1
3,447,574	+		AO353_15575	0.30	-0.8
3,447,574	+		AO353_15575	0.30	+3.9
3,447,574	+		AO353_15575	0.30	-1.5
3,447,932	+		AO353_15575	0.62	+2.0
3,447,932	+		AO353_15575	0.62	-0.7
3,447,932	+		AO353_15575	0.62	-0.2
3,447,932	+		AO353_15575	0.62	+0.9
3,447,932	+		AO353_15575	0.62	+1.1
3,447,932	+		AO353_15575	0.62	-0.2
3,447,932	+		AO353_15575	0.62	+3.8
3,447,933	-		AO353_15575	0.62	-0.8
3,447,933	-		AO353_15575	0.62	-3.2
3,447,933	-		AO353_15575	0.62	-0.4
3,447,933	-		AO353_15575	0.62	-2.7
3,447,933	-		AO353_15575	0.62	-0.3
3,447,933	-		AO353_15575	0.62	+1.8
3,447,943	+		AO353_15575	0.63	-0.3
3,447,944	-		AO353_15575	0.63	+0.8
3,447,944	-		AO353_15575	0.63	+2.7
3,448,104	-		AO353_15575	0.78	+0.5
3,448,120	+		AO353_15575	0.79	-1.4
3,448,120	+		AO353_15575	0.79	+1.9
3,448,121	-		AO353_15575	0.79	+0.1
3,448,121	-		AO353_15575	0.79	+1.1
3,448,121	-		AO353_15575	0.79	-1.8