Experiment: Minimal media pH9
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12370 and AO353_12375 overlap by 4 nucleotides AO353_12375 and AO353_12380 overlap by 1 nucleotides AO353_12380 and AO353_12385 are separated by 155 nucleotides
AO353_12370: AO353_12370 - ubiquinone biosynthesis protein UbiB, at 2,720,692 to 2,722,296
_12370
AO353_12375: AO353_12375 - sterol-binding protein, at 2,722,293 to 2,722,916
_12375
AO353_12380: AO353_12380 - ubiquinone biosynthesis methyltransferase UbiE, at 2,722,916 to 2,723,686
_12380
AO353_12385: AO353_12385 - polyhydroxyalkanoic acid system protein, at 2,723,842 to 2,724,117
_12385
Position (kb)
2722
2723 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2722.559 kb on - strand, within AO353_12375 at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.721 kb on - strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.759 kb on + strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.760 kb on - strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.764 kb on + strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.765 kb on - strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.850 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.853 kb on + strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand at 2723.854 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal media pH9 remove 2,722,559 - AO353_12375 0.43 +1.1 2,723,721 - +1.2 2,723,721 - -0.6 2,723,721 - +0.5 2,723,721 - -0.4 2,723,759 + -1.4 2,723,759 + +1.4 2,723,759 + +1.5 2,723,759 + +2.3 2,723,759 + +4.4 2,723,759 + +0.8 2,723,759 + -0.2 2,723,760 - -1.2 2,723,760 - -1.8 2,723,760 - +0.2 2,723,760 - -1.9 2,723,760 - -1.4 2,723,760 - +0.8 2,723,760 - +0.5 2,723,760 - +2.1 2,723,760 - +0.8 2,723,760 - -0.8 2,723,764 + +3.6 2,723,764 + -0.0 2,723,764 + -1.7 2,723,764 + +1.6 2,723,764 + +0.3 2,723,765 - +2.1 2,723,765 - +0.2 2,723,765 - +1.2 2,723,765 - +2.4 2,723,850 + +0.6 2,723,850 + -1.4 2,723,850 + +0.3 2,723,850 + -0.1 2,723,850 + +0.1 2,723,853 + +1.1 2,723,853 + -1.1 2,723,853 + +1.4 2,723,853 + +0.6 2,723,853 + +0.9 2,723,853 + +0.4 2,723,854 - -1.7 2,723,854 - -0.4 2,723,854 - -0.1 2,723,854 - -0.9 2,723,854 - -2.5 2,723,854 - +1.7 2,723,854 - +2.3 2,723,854 - -1.1 2,723,854 - +1.1 2,723,854 - -1.5
Or see this region's nucleotide sequence