Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11910

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
2,627,047	+		AO353_11905	0.73	-1.4
2,627,047	+		AO353_11905	0.73	-1.3
2,627,047	+		AO353_11905	0.73	-1.5
2,627,047	+		AO353_11905	0.73	-0.8
2,627,048	-		AO353_11905	0.73	+0.4
2,627,048	-		AO353_11905	0.73	+1.2
2,627,087	-		AO353_11905	0.75	+0.8
2,627,152	-		AO353_11905	0.77	+0.4
2,627,218	+		AO353_11905	0.79	+1.5
2,627,218	+		AO353_11905	0.79	+0.4
2,627,218	+		AO353_11905	0.79	-1.5
2,627,218	+		AO353_11905	0.79	+0.5
2,627,218	+		AO353_11905	0.79	-1.0
2,627,218	+		AO353_11905	0.79	-1.0
2,627,218	+		AO353_11905	0.79	-0.6
2,627,218	+		AO353_11905	0.79	-1.2
2,627,218	+		AO353_11905	0.79	-0.2
2,627,218	+		AO353_11905	0.79	-0.6
2,627,218	+		AO353_11905	0.79	-0.1
2,627,219	-		AO353_11905	0.79	+1.4
2,627,219	-		AO353_11905	0.79	+0.1
2,627,219	-		AO353_11905	0.79	+2.6
2,627,219	-		AO353_11905	0.79	-0.0
2,627,219	-		AO353_11905	0.79	+1.0
2,627,219	-		AO353_11905	0.79	-2.1
2,627,219	-		AO353_11905	0.79	+0.2
2,627,219	-		AO353_11905	0.79	+2.4
2,627,219	-		AO353_11905	0.79	-0.1
2,627,219	-		AO353_11905	0.79	+2.1
2,627,219	-		AO353_11905	0.79	-1.3
2,627,219	-		AO353_11905	0.79	+1.4
2,627,219	-		AO353_11905	0.79	-1.3
2,627,219	-		AO353_11905	0.79	+0.8
2,627,321	+		AO353_11905	0.83	-0.5
2,627,321	+		AO353_11905	0.83	-0.0
2,627,322	-		AO353_11905	0.83	-0.7
2,627,352	+		AO353_11905	0.84	+1.3
2,627,352	+		AO353_11905	0.84	-0.1
2,627,352	+		AO353_11905	0.84	-2.2
2,627,353	-		AO353_11905	0.84	+0.9
2,627,425	+		AO353_11905	0.86	-0.6
2,627,425	+		AO353_11905	0.86	+1.4
2,627,425	+		AO353_11905	0.86	-1.2
2,627,426	-		AO353_11905	0.86	-0.7
2,627,426	-		AO353_11905	0.86	+1.7
2,627,426	-		AO353_11905	0.86	+0.4
2,627,536	+				-1.1
2,627,582	+				+2.2
2,627,583	-				-2.5
2,627,583	-				+1.0
2,627,608	+				+1.9
2,627,609	-				+1.0
2,627,609	-				+2.2
2,627,609	-				-0.6
2,627,725	+				+0.5
2,627,725	+				-2.0
2,627,725	+				+1.1
2,627,725	+				-2.6
2,627,725	+				+1.6
2,627,725	+				+1.1
2,627,725	+				-1.0
2,627,726	-				+0.9
2,627,726	-				-0.2
2,627,793	+				-2.1
2,627,794	-				+0.7
2,627,794	-				+1.7
2,627,824	+				-1.6
2,627,900	+				+1.7
2,627,900	+				+0.8
2,627,900	+				+0.8
2,627,900	+				+0.3
2,627,901	-				-1.7
2,627,901	-				-0.7
2,627,956	+				+0.5
2,628,047	+				-1.9
2,628,048	-				+0.8
2,628,186	+		AO353_11910	0.17	+0.0
2,628,186	+		AO353_11910	0.17	+0.6
2,628,186	+		AO353_11910	0.17	-1.8
2,628,187	-		AO353_11910	0.17	+0.8
2,628,213	+		AO353_11910	0.20	+0.0
2,628,213	+		AO353_11910	0.20	+0.3
2,628,386	+		AO353_11910	0.39	-0.9
2,628,386	+		AO353_11910	0.39	+1.7
2,628,386	+		AO353_11910	0.39	+1.4
2,628,387	-		AO353_11910	0.40	+1.0
2,628,415	-		AO353_11910	0.43	+1.5
2,628,426	+		AO353_11910	0.44	+1.7
2,628,426	+		AO353_11910	0.44	+0.7
2,628,426	+		AO353_11910	0.44	-0.2
2,628,427	-		AO353_11910	0.44	+0.6
2,628,427	-		AO353_11910	0.44	-2.1
2,628,429	+		AO353_11910	0.44	-0.2
2,628,429	+		AO353_11910	0.44	-0.4
2,628,429	+		AO353_11910	0.44	+0.8
2,628,429	+		AO353_11910	0.44	+1.4
2,628,429	+		AO353_11910	0.44	+0.8
2,628,429	+		AO353_11910	0.44	+1.5
2,628,430	-		AO353_11910	0.44	-0.1
2,628,430	-		AO353_11910	0.44	+0.4
2,628,430	-		AO353_11910	0.44	-2.0
2,628,430	-		AO353_11910	0.44	-0.2
2,628,564	+		AO353_11910	0.60	-0.4
2,628,565	-		AO353_11910	0.60	-1.2
2,628,723	+		AO353_11910	0.78	-0.9
2,628,723	+		AO353_11910	0.78	-0.6
2,628,723	+		AO353_11910	0.78	-2.0
2,628,724	-		AO353_11910	0.78	+1.0
2,628,724	-		AO353_11910	0.78	+0.6
2,628,793	+		AO353_11910	0.86	-1.9
2,628,876	+				-2.5
2,628,876	+				+1.0
2,628,876	+				+0.4
2,628,922	+				-1.3
2,628,922	+				-1.8
2,628,922	+				+0.1
2,628,922	+				+2.3
2,628,922	+				-0.4
2,628,922	+				+0.1
2,628,923	-				-0.9
2,628,923	-				+0.1
2,628,923	-				-0.9
2,628,923	-				-0.9
2,628,928	+				-0.7
2,628,928	+				-0.5
2,628,928	+				-1.8
2,628,928	+				-0.0
2,628,928	+				-1.6
2,628,928	+				-1.5
2,628,928	+				-1.3
2,628,928	+				-1.7
2,628,929	-				+1.1
2,628,929	-				+1.7
2,628,929	-				+2.0
2,628,929	-				+0.9
2,628,929	-				+1.1
2,628,929	-				+0.6
2,628,929	-				-1.3
2,628,929	-				-0.8
2,628,929	-				+0.4
2,628,929	-				-0.2
2,628,962	+				-1.4
2,628,962	+				+0.4
2,628,962	+				-1.0
2,628,963	-				-1.2
2,628,963	-				-1.8
2,629,127	+		AO353_11915	0.18	+1.6
2,629,231	+		AO353_11915	0.28	-1.0
2,629,298	+		AO353_11915	0.34	-0.2
2,629,456	+		AO353_11915	0.48	+1.3
2,629,579	+		AO353_11915	0.59	+0.4
2,629,592	+		AO353_11915	0.60	-0.3
2,629,592	+		AO353_11915	0.60	-0.6
2,629,592	+		AO353_11915	0.60	-3.0
2,629,592	+		AO353_11915	0.60	-1.9
2,629,592	+		AO353_11915	0.60	+2.2
2,629,592	+		AO353_11915	0.60	-1.5
2,629,592	+		AO353_11915	0.60	-0.6
2,629,592	+		AO353_11915	0.60	-1.2
2,629,592	+		AO353_11915	0.60	-0.4
2,629,592	+		AO353_11915	0.60	-0.8
2,629,592	+		AO353_11915	0.60	-3.3
2,629,592	+		AO353_11915	0.60	+1.1
2,629,593	-		AO353_11915	0.61	-0.1
2,629,593	-		AO353_11915	0.61	-0.2
2,629,593	-		AO353_11915	0.61	-1.6
2,629,593	-		AO353_11915	0.61	-0.2
2,629,649	+		AO353_11915	0.66	+0.9
2,629,714	+		AO353_11915	0.71	-1.6
2,629,714	+		AO353_11915	0.71	-0.3
2,629,714	+		AO353_11915	0.71	-3.3
2,629,714	+		AO353_11915	0.71	-1.5
2,629,714	+		AO353_11915	0.71	+2.9
2,629,714	+		AO353_11915	0.71	-0.2
2,629,714	+		AO353_11915	0.71	-1.1
2,629,714	+		AO353_11915	0.71	-1.0
2,629,714	+		AO353_11915	0.71	-1.4
2,629,714	+		AO353_11915	0.71	-1.9
2,629,715	-		AO353_11915	0.72	-0.2
2,629,832	+		AO353_11915	0.82	-0.9
2,629,832	+		AO353_11915	0.82	-1.4
2,629,832	+		AO353_11915	0.82	-0.4
2,629,832	+		AO353_11915	0.82	-1.3
2,629,832	+		AO353_11915	0.82	-1.7
2,629,833	-		AO353_11915	0.82	-1.7
2,629,833	-		AO353_11915	0.82	-2.0
2,629,833	-		AO353_11915	0.82	+1.0