Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06155

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
1,371,447	-				+0.5
1,371,447	-				-0.5
1,371,471	+				+2.4
1,371,471	+				-0.8
1,371,471	+				-3.0
1,371,471	+				+1.2
1,371,472	-				+0.9
1,371,472	-				+0.0
1,371,472	-				+0.9
1,371,515	-				+0.9
1,371,517	+				+0.5
1,371,518	-				-1.1
1,371,715	+				-0.4
1,371,715	+				-1.8
1,371,715	+				+0.5
1,371,715	+				+0.3
1,371,715	+				+0.8
1,371,715	+				-0.6
1,371,715	+				-0.8
1,371,715	+				+1.1
1,371,715	+				+0.1
1,371,716	-				-1.7
1,371,716	-				-0.3
1,371,716	-				-0.8
1,371,716	-				+2.8
1,371,716	-				-0.3
1,371,716	-				+0.8
1,371,892	+				+0.1
1,371,892	+				-0.3
1,371,893	-				-0.1
1,371,893	-				-0.4
1,371,893	-				+2.9
1,371,945	+		AO353_06150	0.20	-2.0
1,371,945	+		AO353_06150	0.20	+0.3
1,371,945	+		AO353_06150	0.20	+1.0
1,371,945	+		AO353_06150	0.20	+2.4
1,371,945	+		AO353_06150	0.20	+0.6
1,371,946	-		AO353_06150	0.20	+1.0
1,371,946	-		AO353_06150	0.20	-3.3
1,371,946	-		AO353_06150	0.20	-2.3
1,371,946	-		AO353_06150	0.20	-2.9
1,371,946	-		AO353_06150	0.20	-0.5
1,371,946	-		AO353_06150	0.20	+0.6
1,371,946	-		AO353_06150	0.20	+1.3
1,372,008	+		AO353_06150	0.37	-0.6
1,372,008	+		AO353_06150	0.37	-1.0
1,372,008	+		AO353_06150	0.37	+0.2
1,372,008	+		AO353_06150	0.37	+0.2
1,372,008	+		AO353_06150	0.37	+1.1
1,372,008	+		AO353_06150	0.37	+0.1
1,372,008	+		AO353_06150	0.37	-1.6
1,372,009	-		AO353_06150	0.37	+1.3
1,372,009	-		AO353_06150	0.37	-1.3
1,372,009	-		AO353_06150	0.37	-0.4
1,372,009	-		AO353_06150	0.37	-2.4
1,372,009	-		AO353_06150	0.37	+1.5
1,372,080	+		AO353_06150	0.56	-1.8
1,372,080	+		AO353_06150	0.56	-0.4
1,372,080	+		AO353_06150	0.56	+1.0
1,372,080	+		AO353_06150	0.56	-1.7
1,372,081	-		AO353_06150	0.56	-1.0
1,372,081	-		AO353_06150	0.56	-0.8
1,372,218	+				+0.6
1,372,218	+				+0.3
1,372,219	-				-0.1
1,372,219	-				+1.3
1,372,219	-				+1.1
1,372,219	-				-1.8
1,372,219	-				-0.5
1,372,219	-				+0.8
1,372,219	-				+2.4
1,372,265	-				+0.6
1,372,287	-				-1.0
1,372,348	+				+0.0
1,372,348	+				-0.9
1,372,348	+				-0.8
1,372,348	+				+3.0
1,372,348	+				+0.5
1,372,348	+				+0.0
1,372,348	+				+1.8
1,372,348	+				+0.1
1,372,348	+				+0.7
1,372,348	+				+1.3
1,372,348	+				-0.8
1,372,348	+				+1.1
1,372,349	-				+1.4
1,372,349	-				-2.7
1,372,349	-				-1.0
1,372,349	-				+1.4
1,372,349	-				-1.4
1,372,349	-				+2.6
1,372,349	-				-0.6
1,372,349	-				+0.0
1,372,349	-				-1.5
1,372,349	-				+0.3
1,372,390	+				+2.6
1,372,390	+				+0.3
1,372,390	+				+0.2
1,372,390	+				-0.8
1,372,390	+				-1.4
1,372,391	-				+2.2
1,372,391	-				+0.6
1,372,391	-				+0.1
1,372,401	+				-1.8
1,372,402	-				+0.6
1,372,402	-				+2.2
1,372,410	+				+0.5
1,372,410	+				+0.7
1,372,411	-				+0.8
1,372,411	-				-1.7
1,372,411	-				+0.1
1,372,411	-				-1.5
1,372,411	-				-1.1
1,372,613	+				-1.0
1,372,654	+				-1.4
1,373,030	+		AO353_06155	0.26	-0.8
1,373,030	+		AO353_06155	0.26	+0.1
1,373,030	+		AO353_06155	0.26	-0.1
1,373,030	+		AO353_06155	0.26	-2.9
1,373,030	+		AO353_06155	0.26	-2.0
1,373,030	+		AO353_06155	0.26	-3.5
1,373,031	-		AO353_06155	0.26	-2.7
1,373,031	-		AO353_06155	0.26	-1.1
1,373,031	-		AO353_06155	0.26	-1.4
1,373,031	-		AO353_06155	0.26	-2.4
1,373,031	-		AO353_06155	0.26	-0.6
1,373,123	+		AO353_06155	0.29	-3.0
1,373,123	+		AO353_06155	0.29	-3.3
1,373,123	+		AO353_06155	0.29	-1.4
1,373,123	+		AO353_06155	0.29	-2.3
1,373,123	+		AO353_06155	0.29	-3.0
1,373,123	+		AO353_06155	0.29	+0.8
1,373,123	+		AO353_06155	0.29	-1.0
1,373,123	+		AO353_06155	0.29	-3.9
1,373,123	+		AO353_06155	0.29	-3.2
1,373,124	-		AO353_06155	0.29	-2.9
1,373,124	-		AO353_06155	0.29	-1.1
1,373,149	+		AO353_06155	0.30	+1.5
1,373,165	+		AO353_06155	0.31	-2.6
1,373,165	+				+2.2
1,373,165	+		AO353_06155	0.31	-2.7
1,373,166	-		AO353_06155	0.31	-4.2
1,373,213	+		AO353_06155	0.33	-0.6
1,373,213	+		AO353_06155	0.33	-2.6
1,373,214	-		AO353_06155	0.33	-3.1
1,373,214	-		AO353_06155	0.33	-1.8
1,373,214	-		AO353_06155	0.33	-3.4
1,373,214	-		AO353_06155	0.33	-1.0
1,373,557	+		AO353_06155	0.48	-2.3
1,373,557	+		AO353_06155	0.48	-0.4
1,373,558	-		AO353_06155	0.48	-1.9
1,373,653	-		AO353_06155	0.52	+0.2
1,373,685	-		AO353_06155	0.53	-2.3
1,374,127	+		AO353_06155	0.71	-3.3
1,374,127	+		AO353_06155	0.71	-0.6
1,374,389	-		AO353_06155	0.82	-0.6
1,374,627	-				-2.7
1,374,627	-				-1.0
1,374,627	-				-1.1
1,374,665	+				-3.2
1,374,665	+				-1.4
1,374,665	+				-1.1
1,374,665	+				-3.5
1,374,665	+				+0.8
1,374,666	-				-2.0
1,374,666	-				-2.2
1,374,666	-				-3.8
1,374,666	-				-1.6
1,374,666	-				-1.6
1,374,666	-				-3.3
1,374,756	+				+1.8
1,374,757	-				-1.7
1,374,768	+				-1.7
1,374,769	-				+1.4
1,374,769	-				-0.3
1,374,846	+				-2.0
1,374,865	+		AO353_06160	0.13	-0.1
1,374,865	+		AO353_06160	0.13	+1.0
1,374,868	+		AO353_06160	0.14	+1.7
1,374,868	+		AO353_06160	0.14	-2.0
1,374,869	-		AO353_06160	0.14	-0.4
1,374,869	-		AO353_06160	0.14	+1.0
1,374,869	-		AO353_06160	0.14	+2.1
1,374,869	-		AO353_06160	0.14	-0.3
1,374,925	+		AO353_06160	0.28	+0.7
1,374,925	+		AO353_06160	0.28	+0.2
1,374,925	+		AO353_06160	0.28	+0.2
1,374,925	+		AO353_06160	0.28	+0.2
1,374,925	+		AO353_06160	0.28	-0.5
1,374,925	+		AO353_06160	0.28	+1.9
1,374,925	+		AO353_06160	0.28	-1.5
1,374,925	+		AO353_06160	0.28	-1.2
1,374,925	+		AO353_06160	0.28	+3.4
1,374,926	-		AO353_06160	0.28	-0.1
1,374,926	-		AO353_06160	0.28	+0.1
1,374,926	-		AO353_06160	0.28	-1.8
1,375,241	+				-1.5
1,375,308	+		AO353_06165	0.10	+2.2
1,375,308	+		AO353_06165	0.10	-0.5
1,375,308	+		AO353_06165	0.10	-0.2
1,375,308	+		AO353_06165	0.10	-0.8
1,375,308	+		AO353_06165	0.10	-1.0
1,375,308	+		AO353_06165	0.10	+0.4
1,375,309	-		AO353_06165	0.11	-1.0
1,375,309	-		AO353_06165	0.11	+0.2
1,375,309	-		AO353_06165	0.11	-0.7
1,375,309	-		AO353_06165	0.11	-0.3
1,375,482	+		AO353_06165	0.24	-0.4
1,375,483	-		AO353_06165	0.25	+1.4
1,375,483	-		AO353_06165	0.25	+0.4
1,375,483	-		AO353_06165	0.25	+0.4
1,375,684	+		AO353_06165	0.41	-0.5
1,375,685	-				-0.8