Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05845

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
1,289,592	+		AO353_05840	0.40	+1.6
1,289,593	-		AO353_05840	0.40	-0.4
1,289,706	+		AO353_05840	0.47	+1.2
1,289,707	-		AO353_05840	0.47	-0.0
1,289,808	+		AO353_05840	0.54	+1.3
1,289,808	+		AO353_05840	0.54	+1.1
1,289,808	+		AO353_05840	0.54	+1.6
1,289,808	+		AO353_05840	0.54	+1.5
1,289,808	+		AO353_05840	0.54	+1.9
1,289,808	+		AO353_05840	0.54	+0.4
1,289,808	+		AO353_05840	0.54	-0.2
1,289,808	+		AO353_05840	0.54	-1.0
1,289,808	+		AO353_05840	0.54	-1.6
1,289,808	+		AO353_05840	0.54	-0.8
1,289,808	+		AO353_05840	0.54	+1.2
1,289,808	+		AO353_05840	0.54	+1.2
1,289,808	+		AO353_05840	0.54	-1.3
1,289,808	+		AO353_05840	0.54	+1.1
1,289,808	+		AO353_05840	0.54	-0.3
1,289,808	+		AO353_05840	0.54	-0.9
1,289,811	+		AO353_05840	0.55	-0.7
1,289,811	+		AO353_05840	0.55	+0.1
1,289,811	+		AO353_05840	0.55	-3.2
1,289,811	+		AO353_05840	0.55	+0.7
1,289,811	+		AO353_05840	0.55	+0.6
1,289,811	+		AO353_05840	0.55	+3.2
1,289,811	+		AO353_05840	0.55	+0.4
1,289,812	-		AO353_05840	0.55	-1.7
1,289,812	-				-0.6
1,289,814	+		AO353_05840	0.55	-0.8
1,289,814	+		AO353_05840	0.55	+0.4
1,289,814	+		AO353_05840	0.55	-0.0
1,289,814	+		AO353_05840	0.55	+0.4
1,289,814	+		AO353_05840	0.55	+0.2
1,289,814	+		AO353_05840	0.55	+0.8
1,289,815	-		AO353_05840	0.55	-2.4
1,289,862	+		AO353_05840	0.58	-2.5
1,289,863	-		AO353_05840	0.58	-1.0
1,289,863	-		AO353_05840	0.58	+0.8
1,289,863	-		AO353_05840	0.58	+1.2
1,289,907	+		AO353_05840	0.61	+1.9
1,289,908	-		AO353_05840	0.61	-1.7
1,289,921	+		AO353_05840	0.62	+1.8
1,289,922	-		AO353_05840	0.62	+0.6
1,289,982	+		AO353_05840	0.66	+0.8
1,289,982	+		AO353_05840	0.66	+0.2
1,289,982	+		AO353_05840	0.66	+0.4
1,289,982	+		AO353_05840	0.66	+0.2
1,289,982	+		AO353_05840	0.66	-1.8
1,289,982	+		AO353_05840	0.66	+0.2
1,289,983	-		AO353_05840	0.66	-0.9
1,289,983	-		AO353_05840	0.66	-1.0
1,289,983	-		AO353_05840	0.66	-2.3
1,290,027	+		AO353_05840	0.69	+1.2
1,290,028	-		AO353_05840	0.70	+0.2
1,290,028	-		AO353_05840	0.70	-1.1
1,290,028	-		AO353_05840	0.70	-1.6
1,290,028	-		AO353_05840	0.70	+0.8
1,290,040	+		AO353_05840	0.70	+3.1
1,290,040	+		AO353_05840	0.70	-0.4
1,290,040	+		AO353_05840	0.70	+1.2
1,290,041	-		AO353_05840	0.70	-0.6
1,290,041	-		AO353_05840	0.70	-0.4
1,290,042	+		AO353_05840	0.71	-0.8
1,290,042	+		AO353_05840	0.71	-2.0
1,290,042	+		AO353_05840	0.71	-0.0
1,290,042	+		AO353_05840	0.71	+0.6
1,290,042	+		AO353_05840	0.71	+1.0
1,290,043	-		AO353_05840	0.71	-0.1
1,290,043	-		AO353_05840	0.71	+0.8
1,290,043	-		AO353_05840	0.71	-0.1
1,290,043	-		AO353_05840	0.71	-1.5
1,290,147	+		AO353_05840	0.78	+0.7
1,290,148	-		AO353_05840	0.78	-1.8
1,290,148	-		AO353_05840	0.78	+0.8
1,290,258	+		AO353_05840	0.85	-2.2
1,290,258	+		AO353_05840	0.85	+1.2
1,290,297	+		AO353_05840	0.88	+1.2
1,290,297	+		AO353_05840	0.88	+0.7
1,290,297	+		AO353_05840	0.88	+1.0
1,290,298	-		AO353_05840	0.88	+1.3
1,290,298	-		AO353_05840	0.88	+1.1
1,290,298	-		AO353_05840	0.88	+2.1
1,290,298	-		AO353_05840	0.88	+2.8
1,290,298	-		AO353_05840	0.88	-0.4
1,290,418	+				-0.6
1,290,418	+				-1.7
1,290,419	-				-1.8
1,290,450	+				-0.4
1,290,450	+				+0.7
1,290,451	-				+2.5
1,290,451	-				-0.6
1,290,453	+				-1.5
1,290,453	+				+0.1
1,290,453	+				-1.4
1,290,453	+				+1.0
1,290,454	-				+0.5
1,290,454	-				+1.1
1,290,454	-				-0.1
1,290,454	-				+1.1
1,290,468	+				-0.1
1,290,468	+				+0.8
1,290,468	+				-2.6
1,290,468	+				+0.6
1,290,469	-				-1.9
1,290,500	+				+0.0
1,290,501	-				-0.6
1,290,501	-				+0.6
1,290,501	-				+2.0
1,290,501	-				-0.5
1,290,532	+				+2.2
1,290,533	-				-2.5
1,290,533	-				+1.1
1,290,533	-				-0.1
1,290,533	-				-1.6
1,290,559	+				-2.0
1,290,560	-				+0.6
1,290,560	-				-1.4
1,290,639	-		AO353_05845	0.12	+1.3
1,290,639	-		AO353_05845	0.12	+0.5
1,290,821	+		AO353_05845	0.39	-2.4
1,290,821	+		AO353_05845	0.39	-2.7
1,290,821	+		AO353_05845	0.39	+0.0
1,290,822	-		AO353_05845	0.39	-0.4
1,290,830	+		AO353_05845	0.40	+1.0
1,290,830	+		AO353_05845	0.40	-0.2
1,290,830	+		AO353_05845	0.40	+1.5
1,290,830	+		AO353_05845	0.40	+0.9
1,290,830	+		AO353_05845	0.40	+0.9
1,290,830	+		AO353_05845	0.40	+0.9
1,290,830	+		AO353_05845	0.40	+0.6
1,290,830	+		AO353_05845	0.40	-0.3
1,290,830	+		AO353_05845	0.40	-0.8
1,290,830	+		AO353_05845	0.40	-2.1
1,290,830	+		AO353_05845	0.40	-1.7
1,290,830	+		AO353_05845	0.40	-1.8
1,290,830	+		AO353_05845	0.40	-2.0
1,290,830	+		AO353_05845	0.40	-1.3
1,290,830	+		AO353_05845	0.40	+0.2
1,290,831	-		AO353_05845	0.40	-1.4
1,290,831	-		AO353_05845	0.40	+1.2
1,290,831	-		AO353_05845	0.40	-1.2
1,290,831	-		AO353_05845	0.40	-0.1
1,290,831	-		AO353_05845	0.40	-1.1
1,290,831	-		AO353_05845	0.40	+0.2
1,290,831	-		AO353_05845	0.40	-0.0
1,290,831	-		AO353_05845	0.40	-1.1
1,290,831	-		AO353_05845	0.40	-1.7
1,290,831	-		AO353_05845	0.40	-0.7
1,290,831	-		AO353_05845	0.40	+0.0
1,290,832	+		AO353_05845	0.41	+0.6
1,290,832	+		AO353_05845	0.41	-0.1
1,290,832	+		AO353_05845	0.41	-2.0
1,290,832	+		AO353_05845	0.41	-0.6
1,290,832	+		AO353_05845	0.41	+1.2
1,290,832	+		AO353_05845	0.41	-0.2
1,290,832	+		AO353_05845	0.41	+0.9
1,290,832	+		AO353_05845	0.41	+1.0
1,290,832	+		AO353_05845	0.41	-2.4
1,290,833	-		AO353_05845	0.41	-1.1
1,290,833	-		AO353_05845	0.41	+2.0
1,290,833	-		AO353_05845	0.41	-0.6
1,290,833	-		AO353_05845	0.41	+0.5
1,290,833	-		AO353_05845	0.41	+1.9
1,290,833	-		AO353_05845	0.41	+2.3
1,290,833	-		AO353_05845	0.41	+0.3
1,290,833	-		AO353_05845	0.41	-0.8
1,290,871	+		AO353_05845	0.46	-1.3
1,290,871	+		AO353_05845	0.46	+0.6
1,290,871	+		AO353_05845	0.46	+3.2
1,290,871	+		AO353_05845	0.46	+0.9
1,290,871	+		AO353_05845	0.46	-1.5
1,290,871	+		AO353_05845	0.46	-0.6
1,290,871	+		AO353_05845	0.46	+0.3
1,290,871	+		AO353_05845	0.46	-2.7
1,290,871	+		AO353_05845	0.46	+1.3
1,290,871	+		AO353_05845	0.46	+1.1
1,290,871	+		AO353_05845	0.46	+1.4
1,290,871	+		AO353_05845	0.46	-0.6
1,290,871	+		AO353_05845	0.46	-1.1
1,290,871	+		AO353_05845	0.46	-0.7
1,290,872	-		AO353_05845	0.47	-2.3
1,290,872	-		AO353_05845	0.47	+0.2
1,290,872	-		AO353_05845	0.47	-0.9
1,290,872	-		AO353_05845	0.47	-0.6
1,290,872	-		AO353_05845	0.47	-2.0
1,290,915	+		AO353_05845	0.53	+1.0
1,290,915	+		AO353_05845	0.53	+0.4
1,290,916	-		AO353_05845	0.53	+0.8
1,290,916	-		AO353_05845	0.53	-0.8
1,291,146	+		AO353_05845	0.87	-0.3
1,291,146	+		AO353_05845	0.87	+0.5
1,291,147	-		AO353_05845	0.87	+0.8
1,291,147	-		AO353_05845	0.87	-1.0
1,291,162	+		AO353_05845	0.89	+0.6
1,291,162	+		AO353_05845	0.89	-1.2
1,291,162	+		AO353_05845	0.89	+2.2
1,291,162	+		AO353_05845	0.89	-2.9
1,291,162	+		AO353_05845	0.89	+0.4
1,291,162	+		AO353_05845	0.89	+0.5
1,291,162	+		AO353_05845	0.89	+0.2
1,291,162	+		AO353_05845	0.89	-1.3
1,291,163	-		AO353_05845	0.90	+0.4
1,291,163	-		AO353_05845	0.90	-0.5
1,291,163	-		AO353_05845	0.90	-0.9
1,291,163	-		AO353_05845	0.90	-0.1
1,291,163	-		AO353_05845	0.90	-0.6
1,291,163	-		AO353_05845	0.90	+0.2
1,291,163	-		AO353_05845	0.90	+0.3
1,291,163	-		AO353_05845	0.90	+2.2
1,291,163	-		AO353_05845	0.90	+1.2
1,291,163	-		AO353_05845	0.90	+0.5
1,291,163	-		AO353_05845	0.90	-0.0
1,291,163	-		AO353_05845	0.90	-2.0
1,291,163	-		AO353_05845	0.90	+1.3
1,291,166	+				-2.7
1,291,268	+				-0.0
1,291,269	-				-0.9
1,291,269	-				-1.5
1,291,269	-				+1.4
1,291,280	+				-1.0
1,291,280	+				-0.8
1,291,280	+				-2.0
1,291,280	+				+0.2
1,291,280	+				+1.3
1,291,280	+				-0.4
1,291,280	+				-2.9
1,291,280	+				+1.6
1,291,280	+				-1.5
1,291,280	+				-0.1
1,291,280	+				-0.9
1,291,281	-				+2.2
1,291,281	-				+1.2
1,291,294	+				+2.2
1,291,294	+				-1.9
1,291,294	+				-0.3
1,291,294	+				-1.4
1,291,294	+				-2.1
1,291,294	+				-2.0
1,291,294	+				+1.5
1,291,295	-				+0.3
1,291,295	-				-1.3
1,291,295	-				+1.0
1,291,295	-				-1.6
1,291,298	+				-2.6
1,291,298	+				-0.6
1,291,298	+				+1.1
1,291,298	+				-1.1
1,291,299	-				+0.9
1,291,404	+				-1.5
1,291,410	+				-0.5
1,291,410	+				+1.0
1,291,410	+				+1.7
1,291,410	+				-1.6
1,291,410	+				+1.0
1,291,410	+				-1.0
1,291,410	+				+0.5
1,291,410	+				+0.0
1,291,411	-				-1.0
1,291,411	-				+1.4
1,291,411	-				+2.9
1,291,411	-				+1.0
1,291,411	-				-0.1
1,291,436	+				-0.8
1,291,437	-				-0.0
1,291,437	-				+1.0
1,291,437	-				+1.2
1,291,437	-				+0.4
1,291,495	+				-2.0
1,291,495	+				+0.3
1,291,495	+				+0.9
1,291,495	+				-0.1
1,291,495	+				-2.6
1,291,495	+				+1.2
1,291,495	+				+1.2
1,291,495	+				-2.0
1,291,496	-				+1.6
1,291,496	-				+1.8
1,291,496	-				-0.1
1,291,496	-				-1.5
1,291,496	-				-0.4
1,291,561	+				-0.8
1,291,561	+				+0.4
1,291,561	+				-2.0
1,291,561	+				-1.4
1,291,561	+				+0.2
1,291,561	+				-1.3
1,291,561	+				-0.3
1,291,561	+				-2.0
1,291,562	-				-1.2
1,291,562	-				+1.9
1,291,562	-				+0.9
1,291,562	-				-0.7
1,291,562	-				-0.8
1,291,562	-				+1.9
1,291,562	-				+1.4
1,291,562	-				+1.6
1,291,562	-				+1.0
1,291,685	+		AO353_05850	0.10	-0.5
1,291,685	+		AO353_05850	0.10	+2.3
1,291,685	+		AO353_05850	0.10	+1.8
1,291,685	+		AO353_05850	0.10	-1.5
1,291,685	+		AO353_05850	0.10	+1.1
1,291,685	+		AO353_05850	0.10	+2.2
1,291,686	-		AO353_05850	0.10	-1.0
1,291,686	-		AO353_05850	0.10	+1.5
1,291,686	-		AO353_05850	0.10	+1.1
1,291,686	-		AO353_05850	0.10	+0.0
1,291,686	-		AO353_05850	0.10	+2.2
1,291,686	-		AO353_05850	0.10	+3.5
1,291,686	-		AO353_05850	0.10	-1.1
1,291,686	-		AO353_05850	0.10	+1.2
1,291,835	+		AO353_05850	0.18	-0.8
1,292,051	+		AO353_05850	0.29	+3.8
1,292,052	-		AO353_05850	0.29	+1.2
1,292,052	-		AO353_05850	0.29	-2.2
1,292,195	+		AO353_05850	0.37	-0.1
1,292,196	-		AO353_05850	0.37	+1.6
1,292,216	+		AO353_05850	0.38	-2.3
1,292,216	+		AO353_05850	0.38	-0.8
1,292,216	+		AO353_05850	0.38	-0.7