Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1515

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
1,768,769	+		Pf6N2E2_1513	0.72	+1.3
1,768,769	+		Pf6N2E2_1513	0.72	+0.1
1,768,919	+		Pf6N2E2_1513	0.83	+0.2
1,768,949	+		Pf6N2E2_1513	0.85	-1.0
1,768,949	+		Pf6N2E2_1513	0.85	-0.1
1,768,949	+		Pf6N2E2_1513	0.85	+0.6
1,768,950	-		Pf6N2E2_1513	0.85	-1.5
1,768,950	-		Pf6N2E2_1513	0.85	-2.0
1,768,950	-		Pf6N2E2_1513	0.85	+0.7
1,768,950	-		Pf6N2E2_1513	0.85	-0.8
1,768,950	-		Pf6N2E2_1513	0.85	-0.3
1,769,007	-		Pf6N2E2_1513	0.89	+1.3
1,769,007	-		Pf6N2E2_1513	0.89	+1.0
1,769,007	-		Pf6N2E2_1513	0.89	-0.0
1,769,007	-		Pf6N2E2_1513	0.89	-0.3
1,769,007	-		Pf6N2E2_1513	0.89	-2.0
1,769,007	-		Pf6N2E2_1513	0.89	+0.4
1,769,007	-		Pf6N2E2_1513	0.89	-0.9
1,769,007	-		Pf6N2E2_1513	0.89	-0.0
1,769,007	-		Pf6N2E2_1513	0.89	+0.2
1,769,108	+				-0.3
1,769,109	-				+1.8
1,769,109	-				-1.4
1,769,109	-				-1.1
1,769,109	-				+1.0
1,769,109	-				-0.4
1,769,109	-				+0.7
1,769,109	-				+0.1
1,769,111	-				-2.2
1,769,216	+				+0.6
1,769,216	+				+0.9
1,769,216	+				+2.9
1,769,217	-				-0.6
1,769,217	-				-0.7
1,769,219	-				+1.3
1,769,229	+				-1.2
1,769,230	-				+0.3
1,769,230	-				+1.2
1,769,230	-				-0.8
1,769,230	-				-0.3
1,769,230	-				+0.4
1,769,230	-				+0.0
1,769,230	-				+0.2
1,769,230	-				-0.8
1,769,230	-				+0.7
1,769,233	+				+1.1
1,769,234	-				-0.1
1,769,234	-				-0.1
1,769,234	-				-0.2
1,769,234	-				+1.0
1,769,313	-		Pf6N2E2_1514	0.32	-0.2
1,769,338	-		Pf6N2E2_1514	0.42	+0.1
1,769,338	-		Pf6N2E2_1514	0.42	-0.4
1,769,338	-		Pf6N2E2_1514	0.42	-0.6
1,769,423	-		Pf6N2E2_1514	0.74	+0.9
1,769,460	-		Pf6N2E2_1514	0.88	+0.8
1,769,462	+		Pf6N2E2_1514	0.89	+0.1
1,769,463	-		Pf6N2E2_1514	0.89	-0.6
1,769,471	+				+1.3
1,769,471	+				-0.6
1,769,472	-				+0.2
1,769,472	-				-0.3
1,769,472	-				+0.6
1,769,472	-				+1.0
1,769,472	-				-0.8
1,769,472	-				+1.3
1,769,472	-				+0.3
1,769,495	+				+0.1
1,769,496	-				-0.3
1,769,496	-				-0.4
1,769,496	-				-0.5
1,769,496	-				+0.9
1,769,666	-				+0.3
1,769,666	-				+0.5
1,769,666	-				+0.1
1,769,707	+				-0.1
1,769,708	-				-0.3
1,769,736	+				+1.8
1,769,781	+				+1.0
1,769,782	-				+0.3
1,769,782	-				+2.9
1,769,782	-				+1.9
1,769,859	+				-0.1
1,769,861	+				+1.6
1,769,905	+				-0.4
1,769,905	+				+0.3
1,770,292	-		Pf6N2E2_1515	0.30	+1.3
1,770,292	-		Pf6N2E2_1515	0.30	-0.7
1,770,323	+		Pf6N2E2_1515	0.31	-0.1
1,770,323	+		Pf6N2E2_1515	0.31	-0.5
1,770,324	-		Pf6N2E2_1515	0.31	-0.2
1,770,324	-		Pf6N2E2_1515	0.31	+0.4
1,770,667	+		Pf6N2E2_1515	0.50	-0.7
1,770,735	-		Pf6N2E2_1515	0.54	+0.6
1,770,831	-		Pf6N2E2_1515	0.59	-0.6
1,770,970	+		Pf6N2E2_1515	0.67	-1.1
1,770,971	-		Pf6N2E2_1515	0.67	-1.0
1,770,971	-		Pf6N2E2_1515	0.67	+0.9
1,770,971	-		Pf6N2E2_1515	0.67	-0.3
1,770,971	-		Pf6N2E2_1515	0.67	-0.8
1,770,971	-		Pf6N2E2_1515	0.67	-2.0
1,770,999	+		Pf6N2E2_1515	0.68	-1.9
1,771,059	-		Pf6N2E2_1515	0.72	+0.3
1,771,064	-		Pf6N2E2_1515	0.72	-0.8
1,771,099	-		Pf6N2E2_1515	0.74	+0.4
1,771,101	-		Pf6N2E2_1515	0.74	-0.1
1,771,101	-		Pf6N2E2_1515	0.74	-1.0
1,771,203	+		Pf6N2E2_1515	0.79	-1.0
1,771,332	+		Pf6N2E2_1515	0.87	-0.5
1,771,333	-		Pf6N2E2_1515	0.87	-0.3
1,771,333	-		Pf6N2E2_1515	0.87	-0.2
1,771,333	-		Pf6N2E2_1515	0.87	+1.6
1,771,429	-				-1.2
1,771,429	-				+0.3
1,771,666	+				+0.3
1,771,666	+				-0.2
1,771,666	+				+1.5
1,771,666	+				+0.3
1,771,667	-				+1.1
1,771,667	-				-0.4
1,771,667	-				+0.2
1,771,667	-				-0.1
1,771,778	+				+0.3
1,771,779	-				+0.4
1,771,779	-				-0.6
1,771,779	-				+0.2
1,771,793	+				-0.0
1,771,794	-				-1.2
1,772,009	-		Pf6N2E2_1516	0.26	-0.3
1,772,009	-		Pf6N2E2_1516	0.26	-0.3
1,772,052	-		Pf6N2E2_1516	0.32	+0.7
1,772,211	-		Pf6N2E2_1516	0.53	+0.4
1,772,211	-		Pf6N2E2_1516	0.53	+0.5
1,772,325	-		Pf6N2E2_1516	0.68	-1.5
1,772,347	-		Pf6N2E2_1516	0.71	-0.6
1,772,360	-		Pf6N2E2_1516	0.73	-0.7