Experiment: bromate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1267 and Pf6N2E2_1268 overlap by 33 nucleotides Pf6N2E2_1268 and Pf6N2E2_1269 are separated by 6 nucleotides
Pf6N2E2_1267 - Membrane protein, putative, at 1,493,505 to 1,494,284
_1267
Pf6N2E2_1268 - NADH pyrophosphatase (EC 3.6.1.22), at 1,494,252 to 1,495,082
_1268
Pf6N2E2_1269 - Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17), at 1,495,089 to 1,495,901
_1269
Position (kb)
1494
1495
1496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1493.321 kb on + strand at 1493.322 kb on - strand at 1493.322 kb on - strand at 1493.322 kb on - strand at 1493.404 kb on - strand at 1493.456 kb on - strand at 1493.489 kb on + strand at 1493.489 kb on + strand at 1493.489 kb on + strand at 1493.493 kb on + strand at 1493.493 kb on + strand at 1493.494 kb on - strand at 1493.499 kb on + strand at 1493.500 kb on - strand at 1493.500 kb on - strand at 1493.543 kb on + strand at 1493.543 kb on + strand at 1493.544 kb on - strand at 1493.712 kb on + strand, within Pf6N2E2_1267 at 1493.712 kb on + strand, within Pf6N2E2_1267 at 1493.712 kb on + strand, within Pf6N2E2_1267 at 1493.713 kb on - strand, within Pf6N2E2_1267 at 1493.713 kb on - strand, within Pf6N2E2_1267 at 1493.802 kb on + strand, within Pf6N2E2_1267 at 1493.802 kb on + strand, within Pf6N2E2_1267 at 1493.803 kb on - strand, within Pf6N2E2_1267 at 1493.803 kb on - strand, within Pf6N2E2_1267 at 1493.862 kb on + strand, within Pf6N2E2_1267 at 1493.862 kb on + strand, within Pf6N2E2_1267 at 1493.863 kb on - strand, within Pf6N2E2_1267 at 1493.863 kb on - strand, within Pf6N2E2_1267 at 1493.958 kb on + strand, within Pf6N2E2_1267 at 1493.959 kb on - strand, within Pf6N2E2_1267 at 1493.959 kb on - strand, within Pf6N2E2_1267 at 1494.056 kb on + strand, within Pf6N2E2_1267 at 1494.283 kb on - strand at 1494.298 kb on + strand at 1494.298 kb on + strand at 1494.298 kb on + strand at 1494.299 kb on - strand at 1494.299 kb on - strand at 1494.478 kb on + strand, within Pf6N2E2_1268 at 1494.479 kb on - strand, within Pf6N2E2_1268 at 1494.479 kb on - strand, within Pf6N2E2_1268 at 1494.479 kb on - strand, within Pf6N2E2_1268 at 1494.479 kb on - strand, within Pf6N2E2_1268 at 1494.479 kb on - strand, within Pf6N2E2_1268 at 1494.635 kb on + strand, within Pf6N2E2_1268 at 1494.671 kb on - strand, within Pf6N2E2_1268 at 1494.697 kb on + strand, within Pf6N2E2_1268 at 1494.697 kb on + strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.698 kb on - strand, within Pf6N2E2_1268 at 1494.805 kb on + strand, within Pf6N2E2_1268 at 1494.806 kb on - strand, within Pf6N2E2_1268 at 1494.806 kb on - strand, within Pf6N2E2_1268 at 1494.895 kb on + strand, within Pf6N2E2_1268 at 1494.896 kb on - strand, within Pf6N2E2_1268 at 1495.122 kb on - strand at 1495.222 kb on + strand at 1495.222 kb on + strand, within Pf6N2E2_1269 at 1495.222 kb on + strand, within Pf6N2E2_1269 at 1495.223 kb on - strand, within Pf6N2E2_1269 at 1495.223 kb on - strand, within Pf6N2E2_1269 at 1495.223 kb on - strand, within Pf6N2E2_1269 at 1495.223 kb on - strand, within Pf6N2E2_1269 at 1495.324 kb on + strand, within Pf6N2E2_1269 at 1495.325 kb on - strand, within Pf6N2E2_1269 at 1495.325 kb on - strand, within Pf6N2E2_1269 at 1495.325 kb on - strand, within Pf6N2E2_1269 at 1495.383 kb on - strand, within Pf6N2E2_1269 at 1495.385 kb on - strand, within Pf6N2E2_1269 at 1495.656 kb on + strand, within Pf6N2E2_1269 at 1495.656 kb on + strand, within Pf6N2E2_1269 at 1495.657 kb on - strand, within Pf6N2E2_1269 at 1495.704 kb on + strand, within Pf6N2E2_1269 at 1495.867 kb on - strand at 1495.892 kb on - strand at 1495.892 kb on - strand at 1495.939 kb on + strand at 1495.939 kb on + strand at 1495.939 kb on + strand at 1495.939 kb on + strand at 1495.940 kb on - strand at 1495.940 kb on - strand at 1495.965 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction bromate 0.05 M remove 1,493,321 + -0.7 1,493,322 - -2.6 1,493,322 - -0.1 1,493,322 - -0.5 1,493,404 - +1.5 1,493,456 - -0.2 1,493,489 + +1.3 1,493,489 + -2.1 1,493,489 + -2.2 1,493,493 + -1.4 1,493,493 + +1.6 1,493,494 - -0.2 1,493,499 + -0.9 1,493,500 - +0.2 1,493,500 - -0.1 1,493,543 + -0.0 1,493,543 + +1.5 1,493,544 - +0.7 1,493,712 + Pf6N2E2_1267 0.27 +0.0 1,493,712 + Pf6N2E2_1267 0.27 +0.4 1,493,712 + Pf6N2E2_1267 0.27 -0.8 1,493,713 - Pf6N2E2_1267 0.27 +0.1 1,493,713 - Pf6N2E2_1267 0.27 -1.0 1,493,802 + Pf6N2E2_1267 0.38 -2.4 1,493,802 + Pf6N2E2_1267 0.38 +1.4 1,493,803 - Pf6N2E2_1267 0.38 +0.6 1,493,803 - Pf6N2E2_1267 0.38 +0.9 1,493,862 + Pf6N2E2_1267 0.46 +0.6 1,493,862 + Pf6N2E2_1267 0.46 +0.6 1,493,863 - Pf6N2E2_1267 0.46 -0.4 1,493,863 - Pf6N2E2_1267 0.46 -0.5 1,493,958 + Pf6N2E2_1267 0.58 +0.3 1,493,959 - Pf6N2E2_1267 0.58 -0.1 1,493,959 - Pf6N2E2_1267 0.58 +1.6 1,494,056 + Pf6N2E2_1267 0.71 +0.8 1,494,283 - +1.1 1,494,298 + +0.8 1,494,298 + +0.2 1,494,298 + +0.5 1,494,299 - +0.2 1,494,299 - +0.2 1,494,478 + Pf6N2E2_1268 0.27 +2.4 1,494,479 - Pf6N2E2_1268 0.27 -0.9 1,494,479 - Pf6N2E2_1268 0.27 +0.1 1,494,479 - Pf6N2E2_1268 0.27 +0.8 1,494,479 - Pf6N2E2_1268 0.27 +0.6 1,494,479 - Pf6N2E2_1268 0.27 +0.3 1,494,635 + Pf6N2E2_1268 0.46 +1.9 1,494,671 - Pf6N2E2_1268 0.50 +1.2 1,494,697 + Pf6N2E2_1268 0.54 -0.0 1,494,697 + Pf6N2E2_1268 0.54 +1.3 1,494,698 - Pf6N2E2_1268 0.54 +0.6 1,494,698 - Pf6N2E2_1268 0.54 +0.1 1,494,698 - Pf6N2E2_1268 0.54 -0.9 1,494,698 - Pf6N2E2_1268 0.54 +0.2 1,494,698 - Pf6N2E2_1268 0.54 -1.8 1,494,698 - Pf6N2E2_1268 0.54 -0.1 1,494,805 + Pf6N2E2_1268 0.67 +0.9 1,494,806 - Pf6N2E2_1268 0.67 +0.4 1,494,806 - Pf6N2E2_1268 0.67 +2.2 1,494,895 + Pf6N2E2_1268 0.77 -1.6 1,494,896 - Pf6N2E2_1268 0.77 +0.9 1,495,122 - +0.3 1,495,222 + +0.2 1,495,222 + Pf6N2E2_1269 0.16 -2.1 1,495,222 + Pf6N2E2_1269 0.16 -2.9 1,495,223 - Pf6N2E2_1269 0.16 +0.0 1,495,223 - Pf6N2E2_1269 0.16 -2.6 1,495,223 - Pf6N2E2_1269 0.16 -0.0 1,495,223 - Pf6N2E2_1269 0.16 +0.1 1,495,324 + Pf6N2E2_1269 0.29 +0.1 1,495,325 - Pf6N2E2_1269 0.29 -1.8 1,495,325 - Pf6N2E2_1269 0.29 +0.2 1,495,325 - Pf6N2E2_1269 0.29 +0.4 1,495,383 - Pf6N2E2_1269 0.36 -0.8 1,495,385 - Pf6N2E2_1269 0.36 +1.2 1,495,656 + Pf6N2E2_1269 0.70 -1.1 1,495,656 + Pf6N2E2_1269 0.70 +0.5 1,495,657 - Pf6N2E2_1269 0.70 +0.6 1,495,704 + Pf6N2E2_1269 0.76 +1.1 1,495,867 - +0.6 1,495,892 - +0.3 1,495,892 - +0.9 1,495,939 + +0.6 1,495,939 + -0.1 1,495,939 + -0.2 1,495,939 + -0.1 1,495,940 - +1.1 1,495,940 - +1.4 1,495,965 - +1.2
Or see this region's nucleotide sequence