Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_0888 and Ga0059261_0889 are separated by 350 nucleotides Ga0059261_0889 and Ga0059261_0890 are separated by 64 nucleotides Ga0059261_0890 and Ga0059261_0891 are separated by 19 nucleotides Ga0059261_0891 and Ga0059261_0892 are separated by 52 nucleotides Ga0059261_0892 and Ga0059261_0893 are separated by 27 nucleotides
Ga0059261_0888: Ga0059261_0888 - Uncharacterized conserved protein, at 928,850 to 929,320
_0888
Ga0059261_0889: Ga0059261_0889 - Cold shock proteins, at 929,671 to 929,877
_0889
Ga0059261_0890: Ga0059261_0890 - hypothetical protein, at 929,942 to 930,160
_0890
Ga0059261_0891: Ga0059261_0891 - hypothetical protein, at 930,180 to 930,518
_0891
Ga0059261_0892: Ga0059261_0892 - hypothetical protein, at 930,571 to 930,699
_0892
Ga0059261_0893: Ga0059261_0893 - inosine-5'-monophosphate dehydrogenase, at 930,727 to 932,184
_0893
Position (kb) 930
931 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 929.234 kb on + strand, within Ga0059261_0888 at 929.234 kb on + strand, within Ga0059261_0888 at 929.234 kb on + strand, within Ga0059261_0888 at 929.234 kb on + strand, within Ga0059261_0888 at 929.235 kb on - strand, within Ga0059261_0888 at 929.235 kb on - strand, within Ga0059261_0888 at 929.235 kb on - strand, within Ga0059261_0888 at 929.235 kb on - strand, within Ga0059261_0888 at 929.235 kb on - strand, within Ga0059261_0888 at 929.366 kb on - strand at 929.494 kb on - strand at 929.537 kb on - strand at 929.538 kb on + strand at 929.670 kb on + strand at 929.819 kb on - strand, within Ga0059261_0889 at 929.819 kb on - strand at 929.819 kb on - strand, within Ga0059261_0889 at 929.819 kb on - strand, within Ga0059261_0889 at 929.959 kb on + strand at 929.959 kb on + strand at 929.959 kb on + strand at 929.960 kb on - strand at 929.960 kb on - strand at 930.076 kb on + strand, within Ga0059261_0890 at 930.076 kb on + strand, within Ga0059261_0890 at 930.076 kb on + strand, within Ga0059261_0890 at 930.098 kb on + strand, within Ga0059261_0890 at 930.098 kb on + strand, within Ga0059261_0890 at 930.099 kb on - strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.106 kb on + strand, within Ga0059261_0890 at 930.107 kb on - strand, within Ga0059261_0890 at 930.107 kb on - strand, within Ga0059261_0890 at 930.107 kb on - strand, within Ga0059261_0890 at 930.107 kb on - strand, within Ga0059261_0890 at 930.158 kb on + strand at 930.159 kb on - strand at 930.159 kb on - strand at 930.189 kb on + strand at 930.190 kb on - strand at 930.318 kb on - strand, within Ga0059261_0891 at 930.410 kb on - strand, within Ga0059261_0891 at 930.425 kb on + strand, within Ga0059261_0891 at 930.425 kb on + strand, within Ga0059261_0891 at 930.426 kb on - strand, within Ga0059261_0891 at 930.486 kb on + strand at 930.487 kb on - strand at 930.487 kb on - strand at 930.516 kb on + strand at 930.516 kb on + strand at 930.516 kb on + strand at 930.516 kb on + strand at 930.516 kb on + strand at 930.517 kb on - strand at 930.517 kb on - strand at 930.517 kb on - strand at 930.729 kb on - strand at 930.729 kb on - strand at 930.740 kb on + strand at 930.859 kb on - strand at 930.860 kb on + strand at 930.860 kb on + strand at 930.860 kb on + strand at 930.860 kb on + strand at 930.861 kb on - strand at 930.861 kb on - strand at 930.861 kb on - strand at 930.928 kb on + strand, within Ga0059261_0893 at 930.929 kb on - strand, within Ga0059261_0893 at 930.929 kb on - strand, within Ga0059261_0893 at 931.050 kb on - strand, within Ga0059261_0893 at 931.064 kb on + strand, within Ga0059261_0893 at 931.064 kb on + strand, within Ga0059261_0893
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 929,234 + Ga0059261_0888 0.82 -0.3 929,234 + Ga0059261_0888 0.82 -1.6 929,234 + Ga0059261_0888 0.82 -0.4 929,234 + Ga0059261_0888 0.82 +0.9 929,235 - Ga0059261_0888 0.82 -1.9 929,235 - Ga0059261_0888 0.82 -0.5 929,235 - Ga0059261_0888 0.82 +0.7 929,235 - Ga0059261_0888 0.82 -0.3 929,235 - Ga0059261_0888 0.82 +0.0 929,366 - -0.3 929,494 - +0.2 929,537 - +0.4 929,538 + +0.0 929,670 + +0.4 929,819 - Ga0059261_0889 0.71 -0.8 929,819 - +0.9 929,819 - Ga0059261_0889 0.71 -3.7 929,819 - Ga0059261_0889 0.71 -0.6 929,959 + -0.0 929,959 + +0.4 929,959 + +0.1 929,960 - -0.7 929,960 - -1.1 930,076 + Ga0059261_0890 0.61 +0.6 930,076 + Ga0059261_0890 0.61 +0.4 930,076 + Ga0059261_0890 0.61 +0.3 930,098 + Ga0059261_0890 0.71 -0.8 930,098 + Ga0059261_0890 0.71 -0.5 930,099 - Ga0059261_0890 0.72 -0.2 930,106 + Ga0059261_0890 0.75 -1.3 930,106 + Ga0059261_0890 0.75 -0.6 930,106 + Ga0059261_0890 0.75 +0.9 930,106 + Ga0059261_0890 0.75 -0.3 930,106 + Ga0059261_0890 0.75 -0.8 930,106 + Ga0059261_0890 0.75 +0.1 930,107 - Ga0059261_0890 0.75 +0.3 930,107 - Ga0059261_0890 0.75 +0.9 930,107 - Ga0059261_0890 0.75 +0.5 930,107 - Ga0059261_0890 0.75 -0.5 930,158 + +1.1 930,159 - -0.6 930,159 - +0.3 930,189 + -0.2 930,190 - -0.9 930,318 - Ga0059261_0891 0.41 -1.6 930,410 - Ga0059261_0891 0.68 -0.9 930,425 + Ga0059261_0891 0.72 -1.1 930,425 + Ga0059261_0891 0.72 +0.1 930,426 - Ga0059261_0891 0.73 +0.1 930,486 + -0.4 930,487 - -0.4 930,487 - +0.7 930,516 + +1.4 930,516 + +0.6 930,516 + +2.4 930,516 + -2.1 930,516 + +0.2 930,517 - -0.2 930,517 - +0.6 930,517 - -0.1 930,729 - -1.3 930,729 - +0.4 930,740 + -0.4 930,859 - -4.3 930,860 + -4.5 930,860 + -3.1 930,860 + -1.3 930,860 + -3.3 930,861 - -3.9 930,861 - -1.7 930,861 - -1.7 930,928 + Ga0059261_0893 0.14 -3.8 930,929 - Ga0059261_0893 0.14 -1.2 930,929 - Ga0059261_0893 0.14 -1.7 931,050 - Ga0059261_0893 0.22 -3.4 931,064 + Ga0059261_0893 0.23 -3.8 931,064 + Ga0059261_0893 0.23 -3.9
Or see this region's nucleotide sequence