Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_0633

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGa0059261_0632 and Ga0059261_0633 are separated by 24 nucleotidesGa0059261_0633 and Ga0059261_0634 overlap by 4 nucleotides Ga0059261_0632: Ga0059261_0632 - hypothetical protein, at 671,283 to 673,532 _0632 Ga0059261_0633: Ga0059261_0633 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 673,557 to 674,084 _0633 Ga0059261_0634: Ga0059261_0634 - Delta-aminolevulinic acid dehydratase, at 674,081 to 675,070 _0634 Position (kb) 673 674 675Strain fitness (log2 ratio) -2 -1 0 1 2at 672.724 kb on + strand, within Ga0059261_0632at 672.724 kb on + strandat 672.724 kb on + strand, within Ga0059261_0632at 672.724 kb on + strand, within Ga0059261_0632at 672.725 kb on - strand, within Ga0059261_0632at 672.741 kb on + strand, within Ga0059261_0632at 672.741 kb on + strand, within Ga0059261_0632at 672.742 kb on - strand, within Ga0059261_0632at 672.950 kb on - strand, within Ga0059261_0632at 672.950 kb on - strand, within Ga0059261_0632at 673.054 kb on + strand, within Ga0059261_0632at 673.063 kb on + strand, within Ga0059261_0632at 673.063 kb on + strand, within Ga0059261_0632at 673.064 kb on - strand, within Ga0059261_0632at 673.309 kb on + strandat 673.309 kb on + strandat 673.309 kb on + strandat 673.309 kb on + strandat 673.309 kb on + strandat 673.309 kb on + strandat 673.309 kb on + strandat 673.310 kb on - strandat 673.310 kb on - strandat 673.310 kb on - strandat 673.310 kb on - strandat 673.315 kb on + strandat 673.315 kb on + strandat 673.315 kb on + strandat 673.316 kb on - strandat 673.340 kb on - strandat 673.340 kb on - strandat 673.461 kb on + strandat 673.462 kb on - strandat 673.462 kb on - strandat 673.547 kb on + strandat 673.547 kb on + strandat 673.554 kb on + strandat 673.555 kb on - strandat 673.576 kb on + strandat 673.576 kb on + strandat 673.577 kb on - strandat 673.577 kb on - strandat 673.577 kb on - strandat 673.577 kb on - strandat 673.577 kb on - strandat 673.580 kb on + strandat 673.581 kb on - strandat 673.775 kb on - strand, within Ga0059261_0633at 673.775 kb on - strand, within Ga0059261_0633

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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672,724 + Ga0059261_0632 0.64 -0.7
672,724 + +0.8
672,724 + Ga0059261_0632 0.64 +1.7
672,724 + Ga0059261_0632 0.64 +0.9
672,725 - Ga0059261_0632 0.64 -0.7
672,741 + Ga0059261_0632 0.65 -2.0
672,741 + Ga0059261_0632 0.65 +0.2
672,742 - Ga0059261_0632 0.65 +0.3
672,950 - Ga0059261_0632 0.74 +1.6
672,950 - Ga0059261_0632 0.74 -0.6
673,054 + Ga0059261_0632 0.79 +1.3
673,063 + Ga0059261_0632 0.79 -0.4
673,063 + Ga0059261_0632 0.79 -2.6
673,064 - Ga0059261_0632 0.79 +0.1
673,309 + -1.5
673,309 + -0.9
673,309 + +0.6
673,309 + -0.0
673,309 + +0.3
673,309 + -0.1
673,309 + -0.6
673,310 - +0.3
673,310 - -0.2
673,310 - +0.3
673,310 - +1.1
673,315 + -0.2
673,315 + -0.1
673,315 + -2.1
673,316 - +0.3
673,340 - +1.0
673,340 - +0.6
673,461 + -0.1
673,462 - -0.1
673,462 - +0.2
673,547 + -0.0
673,547 + +1.7
673,554 + +0.3
673,555 - +0.9
673,576 + +0.6
673,576 + -0.0
673,577 - +0.9
673,577 - +2.5
673,577 - +1.5
673,577 - +1.2
673,577 - +0.2
673,580 + +1.1
673,581 - -0.6
673,775 - Ga0059261_0633 0.41 -2.2
673,775 - Ga0059261_0633 0.41 +0.3

Or see this region's nucleotide sequence