Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13195

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,999,794	+		AO356_13190	0.63	+0.1
2,999,794	+		AO356_13190	0.63	+2.2
2,999,795	-		AO356_13190	0.63	-2.8
2,999,840	-		AO356_13190	0.65	+0.4
2,999,840	-		AO356_13190	0.65	+0.0
2,999,907	-		AO356_13190	0.67	+0.5
2,999,907	-		AO356_13190	0.67	+1.9
3,000,097	+		AO356_13190	0.75	+0.4
3,000,098	-		AO356_13190	0.75	-1.2
3,000,098	-		AO356_13190	0.75	-0.6
3,000,098	-		AO356_13190	0.75	+1.8
3,000,124	+		AO356_13190	0.76	-1.3
3,000,124	+		AO356_13190	0.76	+2.1
3,000,124	+		AO356_13190	0.76	+1.1
3,000,125	-		AO356_13190	0.77	+0.2
3,000,125	-		AO356_13190	0.77	+0.6
3,000,125	-		AO356_13190	0.77	-0.9
3,000,125	-		AO356_13190	0.77	-0.1
3,000,166	+		AO356_13190	0.78	-1.1
3,000,166	+		AO356_13190	0.78	-2.5
3,000,166	+		AO356_13190	0.78	-2.3
3,000,166	+		AO356_13190	0.78	+3.1
3,000,166	+		AO356_13190	0.78	+0.9
3,000,167	-		AO356_13190	0.78	+0.4
3,000,167	-		AO356_13190	0.78	+0.7
3,000,167	-		AO356_13190	0.78	+0.8
3,000,175	+		AO356_13190	0.79	+0.4
3,000,175	+		AO356_13190	0.79	+1.2
3,000,175	+		AO356_13190	0.79	-1.7
3,000,176	-		AO356_13190	0.79	-0.5
3,000,176	-		AO356_13190	0.79	-0.7
3,000,176	-		AO356_13190	0.79	-0.2
3,000,176	-		AO356_13190	0.79	+1.2
3,000,207	-		AO356_13190	0.80	+0.3
3,000,268	+		AO356_13190	0.82	-0.6
3,000,289	+		AO356_13190	0.83	+0.0
3,000,290	-		AO356_13190	0.83	+2.3
3,000,340	+		AO356_13190	0.85	+0.6
3,000,340	+		AO356_13190	0.85	+1.6
3,000,340	+		AO356_13190	0.85	+0.9
3,000,340	+		AO356_13190	0.85	+1.0
3,000,340	+		AO356_13190	0.85	-0.1
3,000,340	+		AO356_13190	0.85	+0.5
3,000,341	-		AO356_13190	0.85	-2.3
3,000,341	-		AO356_13190	0.85	+0.1
3,000,341	-		AO356_13190	0.85	+1.8
3,000,341	-		AO356_13190	0.85	+0.6
3,000,341	-		AO356_13190	0.85	+0.8
3,000,341	-		AO356_13190	0.85	-2.0
3,000,341	-		AO356_13190	0.85	+0.6
3,000,341	-		AO356_13190	0.85	-0.5
3,000,484	+				+1.3
3,000,485	-				-0.0
3,000,485	-				-0.3
3,000,499	+				+0.1
3,000,499	+				+1.7
3,000,499	+				-0.3
3,000,499	+				-0.5
3,000,619	+				-0.9
3,000,620	-				-0.8
3,000,620	-				+2.0
3,000,620	-				+0.3
3,000,620	-				-2.4
3,000,620	-				-0.8
3,000,700	+				+0.8
3,000,700	+				-1.7
3,000,700	+				-0.6
3,000,701	-				+0.7
3,000,746	+				-2.5
3,000,746	+				-0.4
3,000,746	+				+0.6
3,000,747	-				-1.3
3,000,747	-				+0.4
3,000,747	-				+1.3
3,000,747	-				-2.3
3,000,747	-				-0.1
3,000,788	+				-0.1
3,000,788	+				-1.0
3,000,788	+				+2.6
3,000,788	+				-1.2
3,000,788	+				-1.2
3,000,788	+				-0.5
3,000,789	-				-1.3
3,000,789	-				+0.8
3,000,789	-				-0.8
3,000,789	-				+0.4
3,000,789	-				-0.7
3,000,789	-				+2.2
3,000,789	-				-1.2
3,000,789	-				-1.2
3,000,792	+				-2.9
3,000,792	+				-1.7
3,000,792	+				+0.3
3,000,792	+				+0.1
3,000,792	+				+1.8
3,000,792	+				+0.2
3,000,793	-				+0.3
3,000,793	-				+1.0
3,000,793	-				+0.6
3,000,793	-				-0.2
3,000,793	-				-0.4
3,000,793	-				-0.1
3,000,793	-				-0.3
3,000,828	+				-1.3
3,000,847	+				-0.8
3,000,847	+				-2.2
3,000,847	+				-1.6
3,000,939	+		AO356_13195	0.25	+0.5
3,000,939	+		AO356_13195	0.25	+0.7
3,000,939	+		AO356_13195	0.25	+0.1
3,000,940	-		AO356_13195	0.25	-0.7
3,000,952	-		AO356_13195	0.27	+3.5
3,000,952	-		AO356_13195	0.27	-0.8
3,000,952	-		AO356_13195	0.27	+0.5
3,001,092	+		AO356_13195	0.51	+0.1
3,001,092	+		AO356_13195	0.51	+1.1
3,001,112	+		AO356_13195	0.55	-2.9
3,001,112	+		AO356_13195	0.55	+0.1
3,001,113	-		AO356_13195	0.55	-0.7
3,001,113	-		AO356_13195	0.55	-2.4
3,001,113	-		AO356_13195	0.55	+1.0
3,001,113	-		AO356_13195	0.55	-0.7
3,001,113	-		AO356_13195	0.55	-1.1
3,001,113	-		AO356_13195	0.55	+2.0
3,001,116	+		AO356_13195	0.55	+1.3
3,001,116	+		AO356_13195	0.55	+0.9
3,001,116	+		AO356_13195	0.55	+0.7
3,001,116	+		AO356_13195	0.55	-0.3
3,001,116	+		AO356_13195	0.55	-2.7
3,001,116	+		AO356_13195	0.55	+2.3
3,001,116	+		AO356_13195	0.55	-2.0
3,001,116	+		AO356_13195	0.55	-1.4
3,001,116	+		AO356_13195	0.55	+1.8
3,001,116	+		AO356_13195	0.55	-0.0
3,001,116	+		AO356_13195	0.55	+0.7
3,001,116	+		AO356_13195	0.55	+1.3
3,001,116	+		AO356_13195	0.55	+0.3
3,001,116	+		AO356_13195	0.55	-0.1
3,001,116	+		AO356_13195	0.55	-1.3
3,001,116	+		AO356_13195	0.55	+0.4
3,001,116	+		AO356_13195	0.55	+1.8
3,001,116	+		AO356_13195	0.55	+0.5
3,001,116	+		AO356_13195	0.55	-2.7
3,001,116	+		AO356_13195	0.55	+1.2
3,001,116	+		AO356_13195	0.55	-1.6
3,001,117	-		AO356_13195	0.55	-1.5
3,001,117	-		AO356_13195	0.55	+0.0
3,001,117	-		AO356_13195	0.55	-0.2
3,001,117	-		AO356_13195	0.55	+1.1
3,001,117	-		AO356_13195	0.55	+0.6
3,001,117	-		AO356_13195	0.55	+0.9
3,001,117	-		AO356_13195	0.55	-1.1
3,001,117	-		AO356_13195	0.55	+0.7
3,001,117	-		AO356_13195	0.55	-2.1
3,001,117	-		AO356_13195	0.55	+0.6
3,001,117	-		AO356_13195	0.55	+0.9
3,001,117	-		AO356_13195	0.55	-2.2
3,001,117	-		AO356_13195	0.55	-1.9
3,001,117	-		AO356_13195	0.55	-2.0
3,001,117	-		AO356_13195	0.55	+1.6
3,001,302	+		AO356_13195	0.87	-1.8
3,001,303	-		AO356_13195	0.87	-0.5
3,001,303	-		AO356_13195	0.87	+1.3
3,001,303	-		AO356_13195	0.87	-0.0
3,001,402	+				+0.4
3,001,402	+				-1.6
3,001,402	+				+1.7
3,001,403	-				-1.1
3,001,445	+				-0.4
3,001,446	-				-0.7
3,001,446	-				+0.4
3,001,574	+				+0.6
3,001,574	+				-0.9
3,001,574	+				-0.3
3,001,575	-				+0.7
3,001,586	+		AO356_13200	0.10	+0.6
3,001,586	+		AO356_13200	0.10	+0.8
3,001,586	+		AO356_13200	0.10	+2.0
3,001,587	-		AO356_13200	0.11	-3.1
3,001,587	-		AO356_13200	0.11	-1.3
3,001,587	-		AO356_13200	0.11	+1.2
3,001,587	-		AO356_13200	0.11	+1.9
3,001,587	-		AO356_13200	0.11	+0.3
3,001,649	+		AO356_13200	0.17	+1.4
3,001,716	-		AO356_13200	0.24	-0.2
3,001,716	-		AO356_13200	0.24	-1.5
3,001,716	-		AO356_13200	0.24	+0.1
3,001,718	+		AO356_13200	0.24	+0.7
3,001,718	+		AO356_13200	0.24	+0.2
3,001,718	+		AO356_13200	0.24	-0.3
3,001,719	-		AO356_13200	0.24	-0.3
3,001,719	-		AO356_13200	0.24	-0.5
3,001,719	-		AO356_13200	0.24	+0.7
3,001,719	-		AO356_13200	0.24	+1.8
3,001,719	-		AO356_13200	0.24	+0.6
3,001,736	+		AO356_13200	0.26	+0.2
3,001,736	+		AO356_13200	0.26	-0.8
3,001,737	-		AO356_13200	0.26	+1.8
3,002,019	+		AO356_13200	0.56	-1.2
3,002,054	+		AO356_13200	0.60	+0.5
3,002,054	+		AO356_13200	0.60	+1.3
3,002,054	+		AO356_13200	0.60	+0.3
3,002,055	-		AO356_13200	0.60	-0.7
3,002,055	-		AO356_13200	0.60	-0.2
3,002,055	-		AO356_13200	0.60	-1.5
3,002,055	-		AO356_13200	0.60	+1.4
3,002,055	-		AO356_13200	0.60	-2.3
3,002,057	+		AO356_13200	0.60	-0.6
3,002,057	+		AO356_13200	0.60	+0.4
3,002,058	-		AO356_13200	0.60	+0.5
3,002,058	-		AO356_13200	0.60	-1.6
3,002,058	-		AO356_13200	0.60	-0.4
3,002,058	-		AO356_13200	0.60	+0.1
3,002,058	-		AO356_13200	0.60	-1.3
3,002,171	-		AO356_13200	0.72	+1.3