Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10235

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,309,483	+		AO356_10230	0.33	-1.0
2,309,483	+		AO356_10230	0.33	-1.5
2,309,483	+		AO356_10230	0.33	-0.3
2,309,483	+		AO356_10230	0.33	+2.4
2,309,483	+		AO356_10230	0.33	-1.3
2,309,483	+		AO356_10230	0.33	+2.0
2,309,483	+		AO356_10230	0.33	-1.2
2,309,483	+		AO356_10230	0.33	+1.2
2,309,484	-		AO356_10230	0.33	+0.7
2,309,484	-		AO356_10230	0.33	+1.0
2,309,484	-		AO356_10230	0.33	-0.5
2,309,539	-		AO356_10230	0.39	-1.5
2,309,539	-		AO356_10230	0.39	+0.3
2,309,539	-		AO356_10230	0.39	+1.2
2,309,615	+		AO356_10230	0.46	-1.5
2,309,615	+		AO356_10230	0.46	-1.4
2,309,616	-		AO356_10230	0.46	-1.6
2,309,660	+		AO356_10230	0.51	-0.0
2,309,660	+		AO356_10230	0.51	-0.6
2,309,661	-		AO356_10230	0.51	+0.6
2,309,661	-		AO356_10230	0.51	-0.0
2,309,661	-		AO356_10230	0.51	-1.3
2,309,661	-		AO356_10230	0.51	+1.8
2,309,661	-		AO356_10230	0.51	-0.5
2,309,661	-		AO356_10230	0.51	+0.4
2,309,727	+		AO356_10230	0.58	+1.4
2,309,727	+		AO356_10230	0.58	+0.7
2,309,728	-		AO356_10230	0.58	-0.5
2,309,728	-		AO356_10230	0.58	-1.3
2,309,728	-		AO356_10230	0.58	-2.2
2,309,930	+		AO356_10230	0.78	+1.6
2,309,930	+		AO356_10230	0.78	-0.2
2,309,930	+		AO356_10230	0.78	+0.2
2,309,930	+		AO356_10230	0.78	+0.7
2,309,931	-		AO356_10230	0.78	-1.8
2,309,931	-		AO356_10230	0.78	-1.3
2,309,931	-		AO356_10230	0.78	-0.3
2,310,023	+		AO356_10230	0.87	-1.9
2,310,131	+				+1.2
2,310,132	-				-0.4
2,310,133	+				+0.4
2,310,134	-				+0.5
2,310,134	-				-2.2
2,310,134	-				+0.3
2,310,134	-				+0.7
2,310,278	-				-1.0
2,310,278	-				+0.2
2,310,279	+				+1.3
2,310,279	+				-2.5
2,310,322	+				+0.7
2,310,322	+				-0.3
2,310,322	+				+0.7
2,310,322	+				+1.2
2,310,322	+				+1.4
2,310,322	+				+1.5
2,310,322	+				+0.1
2,310,322	+				-0.8
2,310,322	+				+1.2
2,310,322	+				-0.9
2,310,322	+				+1.4
2,310,322	+				-2.0
2,310,322	+				-0.8
2,310,322	+				-1.7
2,310,322	+				-3.0
2,310,322	+				+0.9
2,310,322	+				+0.9
2,310,323	-				+0.7
2,310,323	-				-0.3
2,310,323	-				-0.6
2,310,323	-				-1.2
2,310,323	-				-2.0
2,310,323	-				+0.2
2,310,323	-				+1.1
2,310,323	-				-3.1
2,310,323	-				+1.0
2,310,323	-				+0.1
2,310,323	-				+1.6
2,310,323	-				+2.2
2,310,323	-				+1.6
2,310,323	-				+0.2
2,310,323	-				+1.7
2,310,323	-				-1.4
2,310,323	-				-1.3
2,310,323	-				-0.5
2,310,323	-				+0.6
2,310,323	-				-1.3
2,310,323	-				+0.1
2,310,323	-				+0.2
2,310,323	-				+1.8
2,310,323	-				-1.9
2,310,323	-				+0.5
2,310,323	-				+3.1
2,310,323	-				+0.5
2,310,323	-				+0.9
2,310,324	+				+1.5
2,310,324	+				+1.0
2,310,325	-				-2.2
2,310,341	+				-0.5
2,310,341	+				+1.1
2,310,341	+				+1.0
2,310,341	+				+0.4
2,310,341	+				+0.2
2,310,342	-				-1.0
2,310,342	-				+1.2
2,310,370	-				-1.9
2,310,404	+				-0.1
2,310,411	+				+0.0
2,310,411	+				-0.2
2,310,411	+				+1.1
2,310,411	+				+1.6
2,310,411	+				+1.4
2,310,411	+				-2.0
2,310,411	+				+1.4
2,310,411	+				+0.3
2,310,412	-				+0.3
2,310,425	+				+1.1
2,310,425	+				-2.6
2,310,425	+				+0.2
2,310,426	-				+0.8
2,310,435	+				+1.4
2,310,436	-				-2.5
2,310,436	-				+1.7
2,310,473	+				-0.4
2,310,473	+				-1.0
2,310,473	+				+0.8
2,310,473	+				-2.5
2,310,473	+				+0.7
2,310,474	-				-1.1
2,310,474	-				+1.2
2,310,474	-				+0.5
2,310,474	-				+2.3
2,310,604	+		AO356_10235	0.18	-1.4
2,310,604	+		AO356_10235	0.18	+1.7
2,310,604	+		AO356_10235	0.18	-0.9
2,310,604	+		AO356_10235	0.18	+0.2
2,310,604	+		AO356_10235	0.18	+2.3
2,310,604	+		AO356_10235	0.18	+0.2
2,310,605	-		AO356_10235	0.18	-0.1
2,310,605	-		AO356_10235	0.18	-0.8
2,310,605	-		AO356_10235	0.18	+0.5
2,310,605	-		AO356_10235	0.18	-0.6
2,310,605	-		AO356_10235	0.18	+0.3
2,310,605	-		AO356_10235	0.18	-0.7
2,310,605	-		AO356_10235	0.18	+0.3
2,310,605	-		AO356_10235	0.18	+0.5
2,310,795	+		AO356_10235	0.42	-0.8
2,310,796	-		AO356_10235	0.42	-2.2
2,310,796	-		AO356_10235	0.42	+0.3
2,310,796	-		AO356_10235	0.42	-2.2
2,310,806	-		AO356_10235	0.44	-1.1
2,310,806	-		AO356_10235	0.44	+1.8
2,310,806	-		AO356_10235	0.44	+1.8
2,310,823	+		AO356_10235	0.46	-1.6
2,310,823	+		AO356_10235	0.46	-1.5
2,310,823	+		AO356_10235	0.46	-1.6
2,310,851	+		AO356_10235	0.49	+0.9
2,310,852	-		AO356_10235	0.49	+1.5
2,310,907	-		AO356_10235	0.56	-0.4
2,310,937	+		AO356_10235	0.60	+3.2
2,310,938	-		AO356_10235	0.60	-1.4
2,310,938	-		AO356_10235	0.60	-0.7
2,310,938	-		AO356_10235	0.60	-1.2
2,310,938	-		AO356_10235	0.60	+1.8
2,310,950	+		AO356_10235	0.62	+0.1
2,310,950	+		AO356_10235	0.62	+0.3
2,310,951	-		AO356_10235	0.62	-0.0
2,310,963	-		AO356_10235	0.63	+0.9
2,310,963	-		AO356_10235	0.63	-0.7
2,310,985	+		AO356_10235	0.66	+1.1
2,310,985	+		AO356_10235	0.66	-2.2
2,310,985	+		AO356_10235	0.66	+0.6
2,310,986	-		AO356_10235	0.66	-0.0
2,310,986	-		AO356_10235	0.66	+0.4
2,310,986	-		AO356_10235	0.66	-0.8
2,311,069	+		AO356_10235	0.76	+1.3
2,311,070	-		AO356_10235	0.77	-0.8
2,311,070	-		AO356_10235	0.77	+0.1
2,311,070	-		AO356_10235	0.77	-0.5
2,311,231	+				-0.8
2,311,232	-				-0.4
2,311,232	-				+0.3
2,311,248	+				-1.7
2,311,249	-				+1.2
2,311,249	-				+1.4
2,311,314	+				+1.0
2,311,314	+				+1.0
2,311,314	+				+0.1
2,311,315	-				-1.3
2,311,317	+				+2.8
2,311,317	+				-2.7
2,311,317	+				-0.8
2,311,317	+				-0.4
2,311,317	+				+2.8
2,311,318	-				+0.6
2,311,318	-				+0.7
2,311,318	-				-2.2
2,311,318	-				-1.1
2,311,318	-				-0.4
2,311,428	+		AO356_10240	0.26	-0.4
2,311,428	+		AO356_10240	0.26	-0.8
2,311,428	+		AO356_10240	0.26	+0.3
2,311,428	+		AO356_10240	0.26	-0.9
2,311,428	+		AO356_10240	0.26	+0.6
2,311,428	+		AO356_10240	0.26	+0.8
2,311,428	+		AO356_10240	0.26	-1.1
2,311,428	+		AO356_10240	0.26	+0.0
2,311,428	+		AO356_10240	0.26	-0.5
2,311,428	+		AO356_10240	0.26	+0.7
2,311,428	+		AO356_10240	0.26	-1.7
2,311,429	-		AO356_10240	0.26	+1.6
2,311,429	-		AO356_10240	0.26	+0.5
2,311,429	-		AO356_10240	0.26	+1.0
2,311,429	-		AO356_10240	0.26	+0.1
2,311,429	-		AO356_10240	0.26	+0.1
2,311,429	-		AO356_10240	0.26	-0.7
2,311,429	-		AO356_10240	0.26	-1.1
2,311,429	-		AO356_10240	0.26	-0.6
2,311,429	-		AO356_10240	0.26	-0.6
2,311,429	-		AO356_10240	0.26	+0.4
2,311,429	-		AO356_10240	0.26	-0.9
2,311,429	-		AO356_10240	0.26	+0.8
2,311,429	-		AO356_10240	0.26	-0.6
2,311,429	-		AO356_10240	0.26	+0.1
2,311,479	+		AO356_10240	0.33	-0.0
2,311,479	+		AO356_10240	0.33	+1.2
2,311,479	+		AO356_10240	0.33	-1.7
2,311,480	-		AO356_10240	0.33	-2.1
2,311,480	-		AO356_10240	0.33	+1.3
2,311,480	-		AO356_10240	0.33	-0.0
2,311,480	-		AO356_10240	0.33	-1.5
2,311,480	-		AO356_10240	0.33	-2.2
2,311,480	-		AO356_10240	0.33	-1.9
2,311,480	-		AO356_10240	0.33	-0.9
2,311,480	-		AO356_10240	0.33	-1.8
2,311,480	-		AO356_10240	0.33	+2.0
2,311,480	-		AO356_10240	0.33	-0.8
2,311,480	-		AO356_10240	0.33	-1.9
2,311,483	-		AO356_10240	0.34	+1.3
2,311,483	-		AO356_10240	0.34	-1.1
2,311,560	+		AO356_10240	0.45	+0.4
2,311,561	-		AO356_10240	0.46	+0.9
2,311,817	+		AO356_10240	0.84	+0.5
2,311,817	+		AO356_10240	0.84	-0.2
2,311,817	+		AO356_10240	0.84	-2.0
2,311,817	+		AO356_10240	0.84	+1.5
2,311,817	+		AO356_10240	0.84	+1.4
2,311,817	+		AO356_10240	0.84	+1.1
2,311,817	+		AO356_10240	0.84	-2.7
2,311,817	+		AO356_10240	0.84	-0.9
2,311,817	+		AO356_10240	0.84	-0.2
2,311,817	+		AO356_10240	0.84	-1.6
2,311,817	+		AO356_10240	0.84	+1.2
2,311,818	-		AO356_10240	0.84	-1.3
2,311,818	-		AO356_10240	0.84	+2.7
2,311,818	-		AO356_10240	0.84	+0.8
2,311,818	-		AO356_10240	0.84	-0.8
2,311,818	-		AO356_10240	0.84	+0.7
2,311,818	-		AO356_10240	0.84	-0.6
2,311,818	-		AO356_10240	0.84	-0.1
2,311,818	-		AO356_10240	0.84	-0.3
2,311,818	-		AO356_10240	0.84	-1.3
2,311,818	-		AO356_10240	0.84	-1.2
2,311,818	-		AO356_10240	0.84	+1.9
2,311,818	-		AO356_10240	0.84	+2.6
2,311,818	-		AO356_10240	0.84	+0.1
2,311,821	+		AO356_10240	0.85	-0.3
2,311,821	+		AO356_10240	0.85	-2.1
2,311,821	+		AO356_10240	0.85	-2.8
2,311,821	+		AO356_10240	0.85	+0.8
2,311,821	+		AO356_10240	0.85	+1.3
2,311,821	+		AO356_10240	0.85	-1.0
2,311,821	+		AO356_10240	0.85	-0.1
2,311,821	+		AO356_10240	0.85	+1.0
2,311,821	+		AO356_10240	0.85	-0.6
2,311,821	+		AO356_10240	0.85	+1.4
2,311,821	+		AO356_10240	0.85	+0.9
2,311,822	-		AO356_10240	0.85	-1.1
2,311,822	-		AO356_10240	0.85	+1.4
2,311,822	-		AO356_10240	0.85	+1.1
2,311,822	-		AO356_10240	0.85	-1.7
2,311,822	-		AO356_10240	0.85	-1.5
2,311,822	-		AO356_10240	0.85	-0.2
2,311,822	-		AO356_10240	0.85	+1.3
2,311,822	-		AO356_10240	0.85	-1.7
2,311,842	+		AO356_10240	0.88	+1.4
2,311,842	+		AO356_10240	0.88	+2.2
2,311,842	+		AO356_10240	0.88	+0.0
2,311,842	+		AO356_10240	0.88	-0.4
2,311,843	-		AO356_10240	0.88	-0.4
2,311,843	-		AO356_10240	0.88	-1.5
2,311,843	-		AO356_10240	0.88	-1.7
2,311,843	-		AO356_10240	0.88	-0.1
2,312,084	+		AO356_10245	0.21	-0.1
2,312,084	+		AO356_10245	0.21	+1.3
2,312,085	-		AO356_10245	0.21	-1.6
2,312,085	-		AO356_10245	0.21	-0.1
2,312,085	-		AO356_10245	0.21	+1.0
2,312,085	-		AO356_10245	0.21	+0.5
2,312,085	-		AO356_10245	0.21	+1.4