Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_05490

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,229,142	-				+0.4
1,229,142	-				-0.1
1,229,142	-				+0.3
1,229,162	+				+1.2
1,229,162	+				+0.8
1,229,163	-				+0.8
1,229,163	-				+0.7
1,229,243	+		AO356_05485	0.13	+0.3
1,229,243	+		AO356_05485	0.13	+0.3
1,229,243	+		AO356_05485	0.13	+2.4
1,229,243	+		AO356_05485	0.13	-0.4
1,229,244	-		AO356_05485	0.13	+0.0
1,229,244	-		AO356_05485	0.13	+2.2
1,229,244	-		AO356_05485	0.13	+1.0
1,229,244	-		AO356_05485	0.13	+1.5
1,229,346	+		AO356_05485	0.23	-1.6
1,229,346	+		AO356_05485	0.23	-0.1
1,229,346	+		AO356_05485	0.23	+1.2
1,229,395	-		AO356_05485	0.28	-0.9
1,229,395	-		AO356_05485	0.28	+0.1
1,229,438	+		AO356_05485	0.32	-1.7
1,229,438	+		AO356_05485	0.32	+0.1
1,229,439	-		AO356_05485	0.32	+0.8
1,229,439	-		AO356_05485	0.32	-1.0
1,229,491	+		AO356_05485	0.37	+0.0
1,229,491	+		AO356_05485	0.37	-2.8
1,229,492	-		AO356_05485	0.37	-0.1
1,229,492	-		AO356_05485	0.37	-1.5
1,229,528	+		AO356_05485	0.41	+0.3
1,229,528	+		AO356_05485	0.41	-0.5
1,229,621	+		AO356_05485	0.50	-0.6
1,229,622	-		AO356_05485	0.50	-2.2
1,229,622	-		AO356_05485	0.50	+0.2
1,229,622	-		AO356_05485	0.50	+0.9
1,229,718	-		AO356_05485	0.59	-1.8
1,229,753	+		AO356_05485	0.62	+1.4
1,229,753	+		AO356_05485	0.62	-0.1
1,229,753	+		AO356_05485	0.62	+2.7
1,229,753	+		AO356_05485	0.62	+0.0
1,229,753	+		AO356_05485	0.62	+1.3
1,229,754	-		AO356_05485	0.63	+0.2
1,229,754	-		AO356_05485	0.63	+1.1
1,229,754	-		AO356_05485	0.63	-0.8
1,229,754	-		AO356_05485	0.63	+0.5
1,229,754	-		AO356_05485	0.63	+1.6
1,229,754	-		AO356_05485	0.63	-0.3
1,229,855	+		AO356_05485	0.72	+0.9
1,230,157	+				+1.8
1,230,158	-				-0.3
1,230,158	-				+0.3
1,230,158	-				-0.8
1,230,214	+				+0.9
1,230,214	+				+2.3
1,230,214	+				+0.9
1,230,214	+				+1.3
1,230,214	+				-1.2
1,230,214	+				+2.1
1,230,215	-				-1.6
1,230,215	-				+0.3
1,230,215	-				+0.9
1,230,256	+				+1.1
1,230,256	+				-2.3
1,230,257	-				-0.6
1,230,361	+		AO356_05490	0.13	+0.9
1,230,362	-		AO356_05490	0.13	+0.8
1,230,401	+		AO356_05490	0.16	-0.7
1,230,401	+		AO356_05490	0.16	+0.6
1,230,402	-		AO356_05490	0.16	-2.1
1,230,402	-		AO356_05490	0.16	-1.2
1,230,405	-		AO356_05490	0.16	-1.0
1,230,668	-		AO356_05490	0.31	-0.4
1,230,703	+		AO356_05490	0.34	-2.7
1,230,703	+		AO356_05490	0.34	-0.2
1,230,703	+		AO356_05490	0.34	+1.2
1,230,703	+		AO356_05490	0.34	+1.8
1,230,704	-		AO356_05490	0.34	+1.0
1,230,764	-		AO356_05490	0.37	-1.2
1,231,155	-		AO356_05490	0.60	-0.8
1,231,265	+		AO356_05490	0.67	+2.8
1,231,265	+		AO356_05490	0.67	-0.9
1,231,265	+		AO356_05490	0.67	-0.2
1,231,378	+		AO356_05490	0.74	-1.8
1,231,379	-		AO356_05490	0.74	-1.0
1,231,460	-		AO356_05490	0.78	+0.0
1,231,496	-		AO356_05490	0.81	-0.9
1,231,496	-		AO356_05490	0.81	+0.8
1,231,496	-		AO356_05490	0.81	+0.3
1,231,496	-		AO356_05490	0.81	-0.8
1,231,504	+		AO356_05490	0.81	-0.0
1,231,573	+		AO356_05490	0.85	+0.1
1,231,573	+		AO356_05490	0.85	-0.7
1,231,573	+		AO356_05490	0.85	-0.8
1,231,574	-		AO356_05490	0.85	-1.0
1,231,574	-		AO356_05490	0.85	-0.2
1,231,812	+				-1.0
1,231,812	+				-1.0
1,231,812	+				-0.1
1,231,812	+				-0.2
1,231,812	+				-1.4
1,231,812	+				-2.3
1,231,813	-				-0.3
1,231,813	-				-0.1
1,231,813	-				+1.3
1,231,813	-				-1.2
1,231,822	+				-1.4
1,231,822	+				-1.5
1,231,822	+				+2.1
1,231,822	+				+2.5
1,231,823	-				-2.2
1,231,823	-				+1.2
1,231,823	-				+1.8
1,231,939	+				-1.0
1,231,939	+				-1.3
1,231,939	+				+1.3
1,231,939	+				+0.5
1,231,939	+				-0.0
1,231,940	-				+0.1
1,231,940	-				-0.8
1,231,940	-				+1.8
1,231,940	-				+0.6
1,231,940	-				+1.6
1,231,940	-				+0.2
1,231,940	-				-1.7
1,231,976	+				-1.2
1,231,976	+				+2.1
1,231,976	+				+1.2
1,231,977	-				+1.4
1,231,977	-				+1.3
1,231,977	-				-0.1
1,231,977	-				+0.2
1,231,977	-				+1.4
1,232,019	+				+1.2
1,232,020	-				-0.3
1,232,020	-				+0.3
1,232,028	-				+0.4
1,232,028	-				-0.3
1,232,028	-				-0.2
1,232,046	+				-0.9
1,232,046	+				-0.4
1,232,046	+				+1.6
1,232,046	+				+1.1
1,232,047	-				+1.3
1,232,063	+				-2.5
1,232,063	+				+0.2
1,232,064	-				+1.5
1,232,064	-				-1.4
1,232,069	+				+1.1
1,232,069	+				+2.8
1,232,070	-				+0.2
1,232,070	-				-1.6
1,232,079	+				+0.1
1,232,101	-				+0.0
1,232,109	+				-0.9
1,232,109	+				+0.2
1,232,110	-				+1.0
1,232,110	-				+2.2
1,232,110	-				-1.1
1,232,138	-				-2.5
1,232,222	+				+0.2
1,232,222	+				-0.2
1,232,222	+				-1.2
1,232,223	-				+1.4
1,232,255	+		AO356_05495	0.13	+0.5
1,232,256	-		AO356_05495	0.14	-1.1
1,232,402	-		AO356_05495	0.32	+0.9
1,232,495	+		AO356_05495	0.44	-0.8
1,232,495	+		AO356_05495	0.44	-1.3
1,232,495	+		AO356_05495	0.44	+1.2
1,232,495	+		AO356_05495	0.44	+0.9
1,232,495	+		AO356_05495	0.44	+1.9
1,232,496	-		AO356_05495	0.44	+2.3
1,232,496	-		AO356_05495	0.44	+0.5
1,232,496	-		AO356_05495	0.44	+2.6
1,232,561	+		AO356_05495	0.52	-0.8
1,232,588	+		AO356_05495	0.56	-0.6
1,232,588	+		AO356_05495	0.56	+1.6
1,232,589	-		AO356_05495	0.56	+2.0
1,232,633	+		AO356_05495	0.62	+1.5
1,232,634	-		AO356_05495	0.62	+0.3
1,232,654	+		AO356_05495	0.64	+0.3
1,232,654	+		AO356_05495	0.64	-1.9
1,232,654	+		AO356_05495	0.64	+1.6
1,232,654	+		AO356_05495	0.64	-1.8
1,232,654	+		AO356_05495	0.64	-1.8
1,232,654	+		AO356_05495	0.64	-1.1
1,232,654	+		AO356_05495	0.64	-1.0
1,232,655	-		AO356_05495	0.64	+2.2
1,232,747	+		AO356_05495	0.76	+0.3
1,232,747	+		AO356_05495	0.76	-0.5
1,232,748	-		AO356_05495	0.76	-1.4
1,232,815	+		AO356_05495	0.85	+2.6
1,232,816	-		AO356_05495	0.85	-1.4
1,232,816	-		AO356_05495	0.85	+1.5