Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20090

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
4,418,289	+		AO353_20080	0.87	+2.1
4,418,289	+		AO353_20080	0.87	-1.9
4,418,289	+		AO353_20080	0.87	+1.1
4,418,289	+		AO353_20080	0.87	-1.5
4,418,290	-		AO353_20080	0.87	+1.1
4,418,290	-		AO353_20080	0.87	+0.6
4,418,290	-		AO353_20080	0.87	+0.3
4,418,291	+		AO353_20080	0.87	+1.2
4,418,291	+		AO353_20080	0.87	-2.5
4,418,291	+		AO353_20080	0.87	-1.6
4,418,291	+		AO353_20080	0.87	-1.2
4,418,291	+		AO353_20080	0.87	+1.3
4,418,291	+		AO353_20080	0.87	-1.5
4,418,291	+		AO353_20080	0.87	+0.7
4,418,292	-		AO353_20080	0.87	+0.0
4,418,292	-		AO353_20080	0.87	-2.9
4,418,292	-		AO353_20080	0.87	+0.0
4,418,292	-		AO353_20080	0.87	-2.5
4,418,292	-		AO353_20080	0.87	-2.9
4,418,292	-		AO353_20080	0.87	+1.5
4,418,292	-		AO353_20080	0.87	-1.2
4,418,360	+		AO353_20080	0.90	+1.3
4,418,360	+		AO353_20080	0.90	+1.5
4,418,360	+		AO353_20080	0.90	-1.4
4,418,360	+		AO353_20080	0.90	+2.3
4,418,360	+		AO353_20080	0.90	+0.7
4,418,360	+		AO353_20080	0.90	-0.0
4,418,361	-		AO353_20080	0.90	+0.1
4,418,361	-		AO353_20080	0.90	-1.5
4,418,361	-		AO353_20080	0.90	-1.9
4,418,361	-		AO353_20080	0.90	-1.6
4,418,361	-		AO353_20080	0.90	-2.3
4,418,581	+				-1.7
4,418,581	+				+1.2
4,418,582	-				+1.5
4,418,582	-				+1.6
4,418,582	-				+1.5
4,418,582	-				-0.4
4,418,582	-				+1.8
4,418,622	+				-0.7
4,418,622	+				+1.7
4,418,623	-				-0.2
4,418,623	-				-1.0
4,418,623	-				+0.1
4,418,623	-				-1.7
4,418,626	+				+0.2
4,418,627	-				-0.4
4,418,627	-				-0.7
4,418,627	-				+1.6
4,418,640	+				-2.0
4,418,640	+				+0.4
4,418,640	+				-1.2
4,418,640	+				-0.2
4,418,640	+				-1.2
4,418,640	+				+0.8
4,418,641	-				-1.0
4,418,641	-				+1.0
4,418,886	+		AO353_20085	0.58	+0.4
4,418,886	+		AO353_20085	0.58	+1.4
4,418,886	+		AO353_20085	0.58	-1.9
4,418,887	-		AO353_20085	0.58	-0.8
4,418,887	-		AO353_20085	0.58	-0.5
4,418,889	+		AO353_20085	0.59	-1.0
4,418,889	+		AO353_20085	0.59	+2.2
4,418,889	+		AO353_20085	0.59	-1.1
4,418,890	-		AO353_20085	0.59	-0.6
4,418,890	-		AO353_20085	0.59	-1.9
4,418,890	-		AO353_20085	0.59	-2.1
4,418,890	-		AO353_20085	0.59	-1.2
4,418,916	-		AO353_20085	0.65	+0.3
4,418,929	-		AO353_20085	0.67	-2.4
4,418,929	-		AO353_20085	0.67	+2.1
4,418,932	+		AO353_20085	0.68	+1.2
4,418,933	-		AO353_20085	0.68	-0.7
4,418,933	-		AO353_20085	0.68	+2.1
4,418,933	-		AO353_20085	0.68	-0.7
4,418,952	+		AO353_20085	0.72	+0.6
4,418,952	+		AO353_20085	0.72	-0.4
4,418,952	+		AO353_20085	0.72	-3.2
4,418,953	-		AO353_20085	0.72	+0.6
4,418,953	-		AO353_20085	0.72	-1.7
4,418,953	-		AO353_20085	0.72	+1.1
4,418,953	-		AO353_20085	0.72	+0.9
4,418,964	+		AO353_20085	0.75	+2.1
4,418,964	+		AO353_20085	0.75	+0.6
4,418,964	+		AO353_20085	0.75	+0.4
4,418,965	-		AO353_20085	0.75	-2.3
4,418,965	-		AO353_20085	0.75	-1.2
4,419,126	+				-0.1
4,419,126	+				+0.2
4,419,126	+				-0.1
4,419,126	+				-0.4
4,419,126	+				-2.9
4,419,188	+				+1.4
4,419,188	+				-2.9
4,419,188	+				-0.6
4,419,188	+				-0.4
4,419,188	+				+1.4
4,419,189	-				-2.0
4,419,226	+				-1.1
4,419,227	-				+0.6
4,419,262	+				+3.6
4,419,262	+				+2.0
4,419,262	+				-0.4
4,419,262	+				-1.2
4,419,262	+				-0.9
4,419,263	-				+0.8
4,419,263	-				+1.0
4,419,348	+		AO353_20090	0.20	+0.8
4,419,443	+		AO353_20090	0.34	-1.4
4,419,443	+		AO353_20090	0.34	+0.7
4,419,443	+		AO353_20090	0.34	-1.2
4,419,443	+		AO353_20090	0.34	+0.5
4,419,443	+		AO353_20090	0.34	-0.2
4,419,443	+		AO353_20090	0.34	+2.4
4,419,444	-		AO353_20090	0.35	+0.1
4,419,466	+		AO353_20090	0.38	-1.4
4,419,507	+		AO353_20090	0.44	-1.0
4,419,508	-		AO353_20090	0.44	-1.7
4,419,508	-		AO353_20090	0.44	+1.8
4,419,571	-		AO353_20090	0.54	-2.6
4,419,579	-		AO353_20090	0.55	-0.1
4,419,750	+		AO353_20090	0.81	-0.7
4,419,750	+		AO353_20090	0.81	+0.6
4,419,750	+		AO353_20090	0.81	+0.7
4,419,750	+		AO353_20090	0.81	-1.0
4,419,751	-		AO353_20090	0.81	-0.4
4,419,751	-		AO353_20090	0.81	-2.2
4,419,751	-		AO353_20090	0.81	-0.8
4,419,751	-		AO353_20090	0.81	-0.3
4,419,751	-		AO353_20090	0.81	+0.4
4,419,751	-		AO353_20090	0.81	-1.0
4,419,792	+		AO353_20090	0.87	-0.2
4,419,792	+		AO353_20090	0.87	-2.2
4,419,792	+		AO353_20090	0.87	-0.6
4,419,792	+				-1.4
4,419,792	+		AO353_20090	0.87	+2.9
4,419,792	+		AO353_20090	0.87	+0.5
4,419,792	+		AO353_20090	0.87	-2.2
4,419,792	+		AO353_20090	0.87	-0.6
4,419,792	+		AO353_20090	0.87	+0.2
4,419,792	+		AO353_20090	0.87	+0.2
4,419,792	+		AO353_20090	0.87	+0.7
4,419,792	+		AO353_20090	0.87	-1.9
4,419,792	+		AO353_20090	0.87	-1.4
4,419,792	+		AO353_20090	0.87	+1.4
4,419,793	-		AO353_20090	0.87	-2.0
4,419,793	-		AO353_20090	0.87	+0.5
4,419,793	-		AO353_20090	0.87	-0.5
4,419,793	-		AO353_20090	0.87	+0.5
4,419,793	-		AO353_20090	0.87	+0.7
4,419,793	-		AO353_20090	0.87	-1.0
4,419,793	-		AO353_20090	0.87	-2.3
4,419,793	-		AO353_20090	0.87	-1.7
4,419,793	-		AO353_20090	0.87	-0.5
4,419,793	-		AO353_20090	0.87	+1.6
4,419,793	-		AO353_20090	0.87	-0.4
4,419,793	-		AO353_20090	0.87	+0.7
4,419,793	-		AO353_20090	0.87	-0.0
4,419,793	-		AO353_20090	0.87	-1.4
4,419,793	-		AO353_20090	0.87	+0.6
4,419,793	-		AO353_20090	0.87	-1.9
4,419,793	-		AO353_20090	0.87	-2.6
4,420,088	-		AO353_20095	0.16	-0.9
4,420,088	-		AO353_20095	0.16	-0.5
4,420,115	+		AO353_20095	0.18	-4.1
4,420,116	-		AO353_20095	0.18	-0.7
4,420,116	-		AO353_20095	0.18	-2.6
4,420,124	+		AO353_20095	0.19	-1.4
4,420,124	+		AO353_20095	0.19	-1.7
4,420,124	+		AO353_20095	0.19	-1.9
4,420,125	-		AO353_20095	0.19	-1.2
4,420,125	-		AO353_20095	0.19	+0.0
4,420,152	+		AO353_20095	0.21	-1.5
4,420,152	+		AO353_20095	0.21	-1.9
4,420,153	-		AO353_20095	0.21	-2.6
4,420,153	-		AO353_20095	0.21	-0.7
4,420,153	-		AO353_20095	0.21	-3.9
4,420,238	+		AO353_20095	0.27	-2.1
4,420,662	+		AO353_20095	0.59	-1.6
4,420,780	-		AO353_20095	0.68	-0.4