Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17025

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,762,606	+		AO353_17020	0.67	+0.8
3,762,606	+		AO353_17020	0.67	-2.3
3,762,607	-		AO353_17020	0.67	-0.2
3,763,044	+		AO353_17020	0.87	+1.9
3,763,044	+		AO353_17020	0.87	+1.2
3,763,044	+		AO353_17020	0.87	+0.3
3,763,044	+		AO353_17020	0.87	+0.3
3,763,140	-				+0.8
3,763,280	+				+2.8
3,763,281	-				-0.5
3,763,281	-				+1.9
3,763,315	+				+0.0
3,763,316	-				-2.8
3,763,316	-				-1.5
3,763,357	-				+0.6
3,763,417	+				-2.3
3,763,417	+				+0.6
3,763,417	+				-0.4
3,763,417	+				+2.4
3,763,417	+				-0.2
3,763,417	+				-2.0
3,763,417	+				+2.2
3,763,417	+				-3.0
3,763,418	-				-0.3
3,763,418	-				+1.0
3,763,418	-				+0.1
3,763,418	-				+0.6
3,763,418	-				+0.1
3,763,733	+		AO353_17025	0.13	-1.8
3,763,733	+		AO353_17025	0.13	+0.6
3,763,734	-		AO353_17025	0.13	-0.3
3,763,750	+		AO353_17025	0.14	+0.3
3,763,896	+		AO353_17025	0.20	-1.6
3,763,896	+		AO353_17025	0.20	-0.7
3,763,897	-		AO353_17025	0.20	-1.7
3,764,040	-		AO353_17025	0.26	+1.7
3,764,049	+		AO353_17025	0.26	-1.8
3,764,060	+		AO353_17025	0.27	-1.1
3,764,060	+		AO353_17025	0.27	-1.6
3,764,061	-		AO353_17025	0.27	-0.4
3,764,061	-		AO353_17025	0.27	+0.0
3,764,061	-		AO353_17025	0.27	-1.4
3,764,061	-		AO353_17025	0.27	-0.7
3,764,170	+		AO353_17025	0.31	-1.0
3,764,171	-		AO353_17025	0.31	-2.2
3,764,298	-		AO353_17025	0.37	-1.7
3,764,314	+		AO353_17025	0.37	-1.1
3,764,314	+		AO353_17025	0.37	-0.6
3,764,314	+		AO353_17025	0.37	-0.4
3,764,314	+		AO353_17025	0.37	+2.2
3,764,315	-		AO353_17025	0.37	-0.4
3,764,315	-		AO353_17025	0.37	+1.9
3,764,315	-				-0.1
3,764,315	-		AO353_17025	0.37	-2.8
3,764,315	-		AO353_17025	0.37	-0.6
3,764,342	+		AO353_17025	0.38	-0.2
3,764,342	+		AO353_17025	0.38	-0.1
3,764,343	-		AO353_17025	0.38	-0.4
3,764,343	-		AO353_17025	0.38	-1.8
3,764,343	-		AO353_17025	0.38	-0.3
3,764,343	-		AO353_17025	0.38	+2.9
3,764,343	-		AO353_17025	0.38	-2.1
3,764,343	-		AO353_17025	0.38	-2.5
3,764,409	-		AO353_17025	0.41	+0.4
3,764,477	+		AO353_17025	0.44	+1.0
3,764,477	+		AO353_17025	0.44	+0.6
3,764,477	+		AO353_17025	0.44	-0.5
3,764,478	-		AO353_17025	0.44	-0.9
3,764,478	-		AO353_17025	0.44	-0.5
3,764,486	+		AO353_17025	0.44	-2.6
3,764,486	+		AO353_17025	0.44	-0.3
3,764,486	+		AO353_17025	0.44	-0.9
3,764,486	+		AO353_17025	0.44	+0.9
3,764,486	+		AO353_17025	0.44	+1.3
3,764,486	+		AO353_17025	0.44	+0.1
3,764,487	-		AO353_17025	0.44	-1.7
3,764,487	-		AO353_17025	0.44	-0.9
3,764,487	-		AO353_17025	0.44	-0.6
3,764,487	-		AO353_17025	0.44	+0.9
3,764,487	-		AO353_17025	0.44	-1.4
3,764,487	-		AO353_17025	0.44	+0.4
3,764,510	+		AO353_17025	0.45	+0.2
3,764,510	+		AO353_17025	0.45	+0.2
3,764,510	+		AO353_17025	0.45	-1.4
3,764,510	+				+1.9
3,764,510	+		AO353_17025	0.45	+1.1
3,764,511	-		AO353_17025	0.45	+1.9
3,764,511	-		AO353_17025	0.45	-1.3
3,764,638	+		AO353_17025	0.51	-2.2
3,764,638	+				+2.6
3,764,639	-		AO353_17025	0.51	-1.4
3,764,639	-		AO353_17025	0.51	-0.1
3,764,639	-		AO353_17025	0.51	-0.7
3,764,724	-		AO353_17025	0.54	-1.4
3,764,724	-		AO353_17025	0.54	+3.3
3,764,888	+		AO353_17025	0.61	+1.6
3,764,888	+		AO353_17025	0.61	-3.6
3,764,888	+		AO353_17025	0.61	+0.0
3,764,888	+		AO353_17025	0.61	+1.3
3,764,889	-		AO353_17025	0.61	-1.3
3,764,889	-		AO353_17025	0.61	-1.1
3,764,958	-		AO353_17025	0.64	-2.2
3,764,958	-		AO353_17025	0.64	+0.5
3,764,962	+		AO353_17025	0.64	+1.8
3,764,962	+		AO353_17025	0.64	-0.1
3,764,962	+		AO353_17025	0.64	-1.1
3,764,963	-		AO353_17025	0.64	+1.1
3,765,026	+		AO353_17025	0.67	+0.6
3,765,026	+		AO353_17025	0.67	+1.5
3,765,026	+		AO353_17025	0.67	+1.5
3,765,027	-		AO353_17025	0.67	+0.5
3,765,027	-				+0.3
3,765,027	-		AO353_17025	0.67	+1.9
3,765,027	-		AO353_17025	0.67	-3.2
3,765,027	-		AO353_17025	0.67	+0.5
3,765,031	+		AO353_17025	0.67	+0.1
3,765,155	+		AO353_17025	0.72	-3.3
3,765,155	+		AO353_17025	0.72	+0.7
3,765,155	-		AO353_17025	0.72	-0.1
3,765,156	-		AO353_17025	0.72	+1.4
3,765,156	-		AO353_17025	0.72	-1.1
3,765,182	+		AO353_17025	0.73	-0.9
3,765,182	+		AO353_17025	0.73	-0.3
3,765,182	+		AO353_17025	0.73	+0.0
3,765,182	+		AO353_17025	0.73	+0.6
3,765,182	+		AO353_17025	0.73	+1.8
3,765,182	+		AO353_17025	0.73	+0.8
3,765,182	+		AO353_17025	0.73	+0.3
3,765,183	-		AO353_17025	0.73	+0.1
3,765,290	+		AO353_17025	0.78	-1.1
3,765,317	+		AO353_17025	0.79	+0.3
3,765,317	+		AO353_17025	0.79	+1.4
3,765,317	+		AO353_17025	0.79	-2.2
3,765,317	+		AO353_17025	0.79	-1.1
3,765,317	+		AO353_17025	0.79	-0.3
3,765,317	+		AO353_17025	0.79	-1.6
3,765,318	-		AO353_17025	0.79	+1.3
3,765,318	-		AO353_17025	0.79	-2.4
3,765,318	-		AO353_17025	0.79	+0.8
3,765,318	-		AO353_17025	0.79	-2.6
3,765,318	-		AO353_17025	0.79	-2.6
3,765,318	-		AO353_17025	0.79	+0.6
3,765,318	-		AO353_17025	0.79	-1.5
3,765,318	-		AO353_17025	0.79	+0.0
3,765,325	+		AO353_17025	0.79	-1.8
3,765,325	+		AO353_17025	0.79	+1.1
3,765,325	+		AO353_17025	0.79	-0.7
3,765,326	-		AO353_17025	0.79	-0.3
3,765,342	-		AO353_17025	0.80	-2.4
3,765,357	+		AO353_17025	0.81	+1.7
3,765,357	+		AO353_17025	0.81	+0.5
3,765,357	+		AO353_17025	0.81	-1.2
3,765,358	-		AO353_17025	0.81	-1.1
3,765,358	-		AO353_17025	0.81	-3.0
3,765,358	-		AO353_17025	0.81	+2.1
3,765,358	-		AO353_17025	0.81	-1.7
3,765,358	-		AO353_17025	0.81	-1.7
3,765,536	+		AO353_17025	0.88	-0.1
3,765,536	+		AO353_17025	0.88	+2.1
3,765,709	+				+1.6
3,765,819	-				+1.3
3,765,855	+				+0.3
3,765,855	+				-0.1
3,765,855	+				+1.4
3,765,855	+				-0.2
3,765,855	+				+3.1
3,765,855	+				+0.4
3,765,855	+				+0.1
3,765,855	+				+0.5
3,765,856	-				+1.0
3,765,856	-				+1.2
3,765,856	-				-0.4
3,765,856	-				-1.4
3,765,856	-				+1.9
3,765,866	-				-1.9
3,765,955	+				-0.5
3,765,955	+				-1.6
3,765,955	+				-1.4
3,765,956	-				-0.9
3,765,956	-				+2.7
3,765,956	-				+1.4
3,765,979	-				+0.3
3,765,979	-				+0.4
3,765,987	-				+0.2
3,765,987	-				+1.5
3,765,987	-				-2.1
3,766,060	+				-0.4
3,766,061	-				+2.6
3,766,061	-				-1.3
3,766,061	-				+2.1
3,766,227	-		AO353_17030	0.23	+1.4
3,766,243	-		AO353_17030	0.25	+0.5
3,766,243	-		AO353_17030	0.25	+1.6
3,766,243	-		AO353_17030	0.25	+1.6
3,766,243	-		AO353_17030	0.25	+0.5
3,766,243	-		AO353_17030	0.25	-1.6
3,766,353	+		AO353_17030	0.34	-0.9
3,766,353	+		AO353_17030	0.34	+0.6
3,766,353	+		AO353_17030	0.34	+1.0
3,766,353	+		AO353_17030	0.34	+1.3
3,766,353	+		AO353_17030	0.34	+0.3
3,766,353	+		AO353_17030	0.34	-0.7
3,766,353	+		AO353_17030	0.34	+0.3
3,766,353	+		AO353_17030	0.34	+0.3
3,766,353	+		AO353_17030	0.34	+0.6
3,766,353	+		AO353_17030	0.34	+0.3
3,766,354	-		AO353_17030	0.34	-0.4
3,766,354	-		AO353_17030	0.34	+0.5
3,766,354	-		AO353_17030	0.34	-0.7
3,766,354	-		AO353_17030	0.34	+0.4
3,766,354	-		AO353_17030	0.34	-0.9
3,766,354	-		AO353_17030	0.34	-1.9
3,766,354	-		AO353_17030	0.34	+0.2
3,766,354	-		AO353_17030	0.34	-0.3
3,766,354	-		AO353_17030	0.34	+2.2
3,766,354	-		AO353_17030	0.34	+2.2
3,766,354	-		AO353_17030	0.34	-0.6
3,766,354	-		AO353_17030	0.34	+1.9
3,766,354	-		AO353_17030	0.34	-1.3
3,766,354	-		AO353_17030	0.34	+1.0
3,766,354	-		AO353_17030	0.34	+2.4
3,766,355	+		AO353_17030	0.34	+0.6
3,766,355	+		AO353_17030	0.34	-1.6
3,766,356	-		AO353_17030	0.35	+1.0
3,766,356	-		AO353_17030	0.35	-1.7
3,766,356	-		AO353_17030	0.35	+1.3
3,766,440	+		AO353_17030	0.42	+1.0
3,766,440	+		AO353_17030	0.42	+2.0
3,766,440	+		AO353_17030	0.42	-0.1
3,766,440	+		AO353_17030	0.42	+0.3
3,766,440	+		AO353_17030	0.42	+0.7
3,766,440	+		AO353_17030	0.42	+0.7
3,766,440	+		AO353_17030	0.42	-0.7
3,766,441	-		AO353_17030	0.42	-2.1
3,766,441	-		AO353_17030	0.42	+0.7
3,766,441	-		AO353_17030	0.42	-2.8
3,766,441	-		AO353_17030	0.42	+0.8
3,766,441	-		AO353_17030	0.42	-1.3
3,766,441	-		AO353_17030	0.42	+0.5
3,766,441	-		AO353_17030	0.42	+0.2
3,766,727	+		AO353_17030	0.67	+0.0
3,766,728	-		AO353_17030	0.67	-1.6
3,766,728	-		AO353_17030	0.67	+1.8
3,766,782	+		AO353_17030	0.72	-1.1
3,766,782	+		AO353_17030	0.72	+0.2
3,766,782	+		AO353_17030	0.72	-1.2
3,766,782	+		AO353_17030	0.72	+0.5
3,766,782	+		AO353_17030	0.72	-0.7
3,766,783	-		AO353_17030	0.72	+0.3
3,766,783	-		AO353_17030	0.72	+1.9
3,766,783	-		AO353_17030	0.72	+0.1
3,766,783	-		AO353_17030	0.72	+2.7
3,766,783	-		AO353_17030	0.72	+0.8
3,766,783	-		AO353_17030	0.72	+0.8