Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16140

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,577,156	+				+0.2
3,577,208	-				-0.2
3,577,239	+				-0.1
3,577,408	+		AO353_16135	0.24	-0.3
3,577,408	+		AO353_16135	0.24	-2.1
3,577,409	-		AO353_16135	0.24	-1.1
3,577,409	-		AO353_16135	0.24	+2.6
3,577,425	+		AO353_16135	0.26	-1.1
3,577,425	+		AO353_16135	0.26	-2.4
3,577,426	-		AO353_16135	0.26	+1.1
3,577,426	-		AO353_16135	0.26	-1.0
3,577,528	+		AO353_16135	0.37	-2.1
3,577,528	+		AO353_16135	0.37	+0.2
3,577,528	+		AO353_16135	0.37	-0.9
3,577,528	+		AO353_16135	0.37	-0.9
3,577,529	-		AO353_16135	0.37	+0.2
3,577,529	-		AO353_16135	0.37	-0.2
3,577,563	+		AO353_16135	0.41	+0.9
3,577,563	+		AO353_16135	0.41	-1.8
3,577,563	+		AO353_16135	0.41	-1.4
3,577,563	+		AO353_16135	0.41	-1.6
3,577,563	+		AO353_16135	0.41	-2.5
3,577,563	+		AO353_16135	0.41	-2.4
3,577,563	+		AO353_16135	0.41	+2.1
3,577,564	-		AO353_16135	0.41	-0.2
3,577,564	-		AO353_16135	0.41	-1.3
3,577,564	-		AO353_16135	0.41	+1.4
3,577,564	-		AO353_16135	0.41	+0.4
3,577,564	-		AO353_16135	0.41	-0.1
3,577,564	-		AO353_16135	0.41	+1.2
3,577,564	-		AO353_16135	0.41	-1.2
3,577,564	-		AO353_16135	0.41	-2.0
3,577,564	-		AO353_16135	0.41	-1.4
3,577,564	-		AO353_16135	0.41	-1.4
3,577,564	-		AO353_16135	0.41	+1.6
3,577,564	-		AO353_16135	0.41	-0.8
3,577,564	-		AO353_16135	0.41	+0.5
3,577,564	-		AO353_16135	0.41	+0.8
3,577,565	+		AO353_16135	0.41	-0.4
3,577,565	+		AO353_16135	0.41	-0.2
3,577,565	+		AO353_16135	0.41	+2.1
3,577,565	+		AO353_16135	0.41	-2.5
3,577,565	+		AO353_16135	0.41	-1.2
3,577,565	+		AO353_16135	0.41	-1.6
3,577,565	+		AO353_16135	0.41	-0.3
3,577,565	+		AO353_16135	0.41	-2.9
3,577,566	-		AO353_16135	0.41	-0.6
3,577,566	-		AO353_16135	0.41	+0.9
3,577,566	-		AO353_16135	0.41	+0.7
3,577,566	-		AO353_16135	0.41	-1.1
3,577,566	-		AO353_16135	0.41	-0.1
3,577,566	-		AO353_16135	0.41	-0.6
3,577,566	-		AO353_16135	0.41	+0.6
3,577,593	+		AO353_16135	0.44	-1.1
3,577,593	+		AO353_16135	0.44	-0.9
3,577,593	+		AO353_16135	0.44	-0.0
3,577,593	+		AO353_16135	0.44	-0.4
3,577,593	+		AO353_16135	0.44	+1.8
3,577,593	+		AO353_16135	0.44	+0.2
3,577,594	-		AO353_16135	0.44	-1.9
3,577,594	-		AO353_16135	0.44	+1.7
3,577,617	+		AO353_16135	0.46	+0.2
3,577,617	+		AO353_16135	0.46	-1.1
3,577,617	+		AO353_16135	0.46	+0.4
3,577,618	-		AO353_16135	0.46	+1.5
3,577,618	-		AO353_16135	0.46	+0.1
3,577,618	-		AO353_16135	0.46	+0.2
3,577,618	-		AO353_16135	0.46	+0.4
3,577,620	-		AO353_16135	0.47	-2.5
3,577,706	-		AO353_16135	0.56	+0.7
3,577,758	+		AO353_16135	0.61	-2.0
3,577,759	-		AO353_16135	0.61	+0.9
3,577,835	+		AO353_16135	0.70	-1.5
3,577,835	+		AO353_16135	0.70	+0.8
3,577,835	+		AO353_16135	0.70	-0.1
3,577,835	+		AO353_16135	0.70	-0.3
3,577,836	-		AO353_16135	0.70	+1.6
3,577,836	-		AO353_16135	0.70	-0.4
3,577,844	+		AO353_16135	0.71	+3.2
3,577,845	-		AO353_16135	0.71	-0.4
3,577,845	-		AO353_16135	0.71	-1.6
3,577,845	-		AO353_16135	0.71	-0.0
3,577,848	-		AO353_16135	0.71	+0.1
3,577,872	+		AO353_16135	0.73	+1.0
3,577,872	+		AO353_16135	0.73	-2.0
3,577,872	+		AO353_16135	0.73	-1.0
3,577,872	+		AO353_16135	0.73	-1.6
3,577,872	+		AO353_16135	0.73	-1.8
3,577,872	+		AO353_16135	0.73	-1.1
3,577,872	+		AO353_16135	0.73	-1.1
3,577,872	+		AO353_16135	0.73	-0.6
3,577,872	+		AO353_16135	0.73	-2.0
3,577,872	+		AO353_16135	0.73	-0.7
3,577,872	+		AO353_16135	0.73	-1.8
3,577,873	-		AO353_16135	0.74	-0.1
3,577,873	-		AO353_16135	0.74	+1.2
3,577,873	-		AO353_16135	0.74	+0.7
3,577,873	-		AO353_16135	0.74	+0.0
3,577,873	-		AO353_16135	0.74	+1.5
3,577,873	-		AO353_16135	0.74	+0.9
3,577,873	-		AO353_16135	0.74	-0.3
3,577,917	+		AO353_16135	0.78	-0.4
3,577,917	+		AO353_16135	0.78	-1.1
3,577,917	+		AO353_16135	0.78	+0.4
3,577,918	-		AO353_16135	0.78	-0.5
3,577,918	-		AO353_16135	0.78	-0.6
3,577,918	-		AO353_16135	0.78	+1.0
3,577,918	-		AO353_16135	0.78	-0.1
3,577,918	-		AO353_16135	0.78	+0.7
3,577,949	+		AO353_16135	0.82	-0.2
3,577,987	+		AO353_16135	0.86	-0.2
3,578,034	+				+0.1
3,578,035	-				-1.8
3,578,035	-				+2.6
3,578,049	+				+0.0
3,578,050	-				+3.1
3,578,134	-				-1.0
3,578,134	-				+0.9
3,578,195	+				+1.7
3,578,197	+				-0.9
3,578,197	+				+0.9
3,578,223	-				-2.1
3,578,228	+				-1.8
3,578,228	+				-1.4
3,578,230	+				-3.6
3,578,230	+				+0.6
3,578,230	+				+1.1
3,578,232	+				+0.9
3,578,233	-				-1.9
3,578,233	-				-0.1
3,578,233	-				-1.8
3,578,233	-				+1.4
3,578,306	+		AO353_16140	0.13	+2.4
3,578,306	+		AO353_16140	0.13	-2.6
3,578,306	+		AO353_16140	0.13	-0.9
3,578,306	+		AO353_16140	0.13	-2.5
3,578,306	+		AO353_16140	0.13	-0.9
3,578,341	+		AO353_16140	0.15	+0.7
3,578,341	+		AO353_16140	0.15	+0.1
3,578,341	+		AO353_16140	0.15	-0.6
3,578,341	+		AO353_16140	0.15	-0.4
3,578,342	-		AO353_16140	0.15	+0.4
3,578,342	-		AO353_16140	0.15	+1.8
3,578,342	-		AO353_16140	0.15	-1.9
3,578,342	-		AO353_16140	0.15	-1.4
3,578,411	+		AO353_16140	0.20	-2.5
3,578,412	-		AO353_16140	0.20	+0.7
3,578,412	-				-0.1
3,578,412	-		AO353_16140	0.20	+2.2
3,578,412	-		AO353_16140	0.20	-1.4
3,578,412	-		AO353_16140	0.20	+2.1
3,578,415	-				+0.9
3,578,463	-		AO353_16140	0.23	+0.1
3,578,463	-		AO353_16140	0.23	-0.1
3,578,463	-		AO353_16140	0.23	-1.1
3,578,488	-		AO353_16140	0.25	-1.3
3,578,492	+		AO353_16140	0.25	+1.3
3,578,492	+		AO353_16140	0.25	-0.3
3,578,498	+		AO353_16140	0.25	+0.7
3,578,498	+		AO353_16140	0.25	-0.1
3,578,498	+		AO353_16140	0.25	-2.6
3,578,540	+		AO353_16140	0.28	-1.8
3,578,540	+		AO353_16140	0.28	+0.5
3,578,540	+		AO353_16140	0.28	-0.7
3,578,540	+		AO353_16140	0.28	+1.4
3,578,540	+		AO353_16140	0.28	+1.9
3,578,541	-		AO353_16140	0.28	+1.3
3,578,541	-		AO353_16140	0.28	-3.3
3,578,541	-		AO353_16140	0.28	+2.1
3,578,541	-		AO353_16140	0.28	+2.1
3,578,541	-		AO353_16140	0.28	-2.5
3,578,560	+		AO353_16140	0.29	-0.9
3,578,560	+		AO353_16140	0.29	+0.4
3,578,560	+		AO353_16140	0.29	-2.4
3,578,561	-		AO353_16140	0.29	+0.2
3,578,561	-		AO353_16140	0.29	+2.8
3,578,561	-		AO353_16140	0.29	+1.2
3,578,561	-		AO353_16140	0.29	+0.1
3,578,561	-		AO353_16140	0.29	-1.2
3,578,561	-		AO353_16140	0.29	-1.5
3,578,621	+		AO353_16140	0.33	+2.8
3,578,621	+		AO353_16140	0.33	-0.8
3,578,621	+		AO353_16140	0.33	-2.1
3,578,621	+		AO353_16140	0.33	-0.9
3,578,622	-		AO353_16140	0.34	+0.4
3,578,622	-		AO353_16140	0.34	-1.1
3,578,632	+		AO353_16140	0.34	+1.5
3,578,633	-		AO353_16140	0.34	+0.5
3,578,686	+		AO353_16140	0.38	+0.8
3,578,706	+		AO353_16140	0.39	+0.5
3,578,706	+		AO353_16140	0.39	-0.1
3,578,707	-		AO353_16140	0.39	+1.6
3,578,759	+		AO353_16140	0.43	+1.0
3,578,856	+		AO353_16140	0.49	-0.4
3,578,857	-		AO353_16140	0.49	-0.9
3,578,860	-		AO353_16140	0.49	-0.8
3,578,960	-		AO353_16140	0.56	-0.4
3,579,027	+		AO353_16140	0.60	-3.1
3,579,097	-		AO353_16140	0.65	-2.0
3,579,180	+		AO353_16140	0.71	+0.9
3,579,180	+		AO353_16140	0.71	+0.8
3,579,180	+		AO353_16140	0.71	+2.6
3,579,181	-		AO353_16140	0.71	+2.7
3,579,181	-		AO353_16140	0.71	-1.1
3,579,181	-		AO353_16140	0.71	+1.9
3,579,202	+		AO353_16140	0.72	+0.5
3,579,202	+		AO353_16140	0.72	-0.9
3,579,219	-		AO353_16140	0.73	+0.7
3,579,219	-		AO353_16140	0.73	-1.3
3,579,284	+		AO353_16140	0.77	+1.4
3,579,284	+		AO353_16140	0.77	+2.5
3,579,289	+		AO353_16140	0.78	+1.1
3,579,329	+		AO353_16140	0.80	+0.6
3,579,329	+		AO353_16140	0.80	-1.1
3,579,330	-		AO353_16140	0.81	-0.9
3,579,330	-		AO353_16140	0.81	-1.4
3,579,330	-		AO353_16140	0.81	+2.4
3,579,330	-		AO353_16140	0.81	-2.7
3,579,330	-		AO353_16140	0.81	-0.0
3,579,404	+		AO353_16140	0.85	-0.4
3,579,405	-		AO353_16140	0.86	+1.2
3,579,405	-		AO353_16140	0.86	+1.3
3,579,405	-		AO353_16140	0.86	+1.0
3,579,426	-		AO353_16140	0.87	+1.4
3,579,504	+				-2.8
3,579,505	-				-1.9
3,579,545	+				-1.9
3,579,550	+				+0.6
3,579,550	+				-0.6
3,579,550	+				+1.5
3,579,550	+				+1.6
3,579,550	+				+1.4
3,579,550	+				+1.6
3,579,551	-				-2.2
3,579,551	-				-0.8
3,579,551	-				+2.4
3,579,555	-				+0.7
3,579,583	+				-0.9
3,579,613	+				+2.6
3,579,613	+				-3.0
3,579,614	-				+1.4
3,579,614	-				-1.5
3,579,614	-				+2.2
3,579,620	+				+0.1
3,579,621	-				-1.1
3,579,681	+				-2.1
3,579,681	+				-0.1
3,579,682	-				+0.4
3,579,682	-				+1.6
3,579,702	-				+1.7
3,579,721	-				-1.9
3,579,750	+				+1.7
3,579,750	+				-0.6
3,579,750	+				-2.1
3,579,750	+				-1.1
3,579,750	+				+2.5
3,579,750	+				+1.9
3,579,751	-				-0.6
3,579,751	-				+0.6
3,579,751	-				+0.5
3,579,769	+		AO353_16145	0.10	-0.4
3,579,769	+		AO353_16145	0.10	-0.5
3,579,769	+		AO353_16145	0.10	-1.6
3,579,823	+		AO353_16145	0.14	-3.1
3,579,823	+		AO353_16145	0.14	+1.1
3,579,823	+		AO353_16145	0.14	+0.6
3,579,823	+		AO353_16145	0.14	+0.7
3,579,823	+		AO353_16145	0.14	+1.0
3,579,823	+		AO353_16145	0.14	-0.4
3,579,823	+		AO353_16145	0.14	+2.3
3,579,823	+		AO353_16145	0.14	-1.4
3,579,826	+		AO353_16145	0.14	+0.0
3,579,826	+		AO353_16145	0.14	+2.7
3,579,826	+		AO353_16145	0.14	+1.7
3,579,826	+		AO353_16145	0.14	+4.2
3,579,826	+		AO353_16145	0.14	-1.1
3,579,826	+		AO353_16145	0.14	-1.3
3,579,999	-		AO353_16145	0.25	-0.4
3,580,004	+		AO353_16145	0.25	+1.1
3,580,009	+		AO353_16145	0.26	+0.7
3,580,009	+		AO353_16145	0.26	-0.6
3,580,009	+		AO353_16145	0.26	-0.6
3,580,009	+		AO353_16145	0.26	+1.2
3,580,009	+		AO353_16145	0.26	-1.9
3,580,010	-		AO353_16145	0.26	-0.8
3,580,010	-		AO353_16145	0.26	-0.8
3,580,030	+		AO353_16145	0.27	+0.7
3,580,030	+		AO353_16145	0.27	+2.2
3,580,030	+		AO353_16145	0.27	-1.3
3,580,030	+		AO353_16145	0.27	-0.6
3,580,030	+		AO353_16145	0.27	-1.1
3,580,030	+		AO353_16145	0.27	-2.2
3,580,031	-		AO353_16145	0.27	-0.5
3,580,031	-		AO353_16145	0.27	+0.5
3,580,031	-		AO353_16145	0.27	+0.3
3,580,031	-		AO353_16145	0.27	-0.6
3,580,031	-		AO353_16145	0.27	+0.5
3,580,031	-		AO353_16145	0.27	+1.4
3,580,031	-		AO353_16145	0.27	+0.3
3,580,031	-		AO353_16145	0.27	+0.2
3,580,031	-		AO353_16145	0.27	+1.1
3,580,031	-		AO353_16145	0.27	-1.2
3,580,031	-		AO353_16145	0.27	+0.4
3,580,031	-		AO353_16145	0.27	+1.8
3,580,031	-		AO353_16145	0.27	-1.5
3,580,049	+		AO353_16145	0.28	-1.1
3,580,078	+		AO353_16145	0.30	+2.7
3,580,079	-		AO353_16145	0.30	+0.2
3,580,085	+		AO353_16145	0.31	-0.6
3,580,086	-		AO353_16145	0.31	-0.9
3,580,120	+		AO353_16145	0.33	-1.1
3,580,120	+		AO353_16145	0.33	+0.2
3,580,120	+		AO353_16145	0.33	-0.1
3,580,120	+		AO353_16145	0.33	-1.5
3,580,120	+		AO353_16145	0.33	-1.0
3,580,120	+		AO353_16145	0.33	-2.8
3,580,120	+		AO353_16145	0.33	-2.2
3,580,120	+		AO353_16145	0.33	+1.7
3,580,121	-		AO353_16145	0.33	+0.1
3,580,121	-		AO353_16145	0.33	-0.2
3,580,121	-		AO353_16145	0.33	-0.9
3,580,121	-		AO353_16145	0.33	-2.3
3,580,121	-		AO353_16145	0.33	+1.9
3,580,121	-		AO353_16145	0.33	+0.9
3,580,121	-		AO353_16145	0.33	+0.9
3,580,121	-		AO353_16145	0.33	-0.4
3,580,121	-		AO353_16145	0.33	-0.3
3,580,121	-		AO353_16145	0.33	+0.0
3,580,121	-		AO353_16145	0.33	+1.7
3,580,122	+		AO353_16145	0.33	+1.8
3,580,122	+		AO353_16145	0.33	+3.3
3,580,147	+		AO353_16145	0.35	+2.2
3,580,147	+		AO353_16145	0.35	+1.6
3,580,148	-		AO353_16145	0.35	+1.4
3,580,150	-		AO353_16145	0.35	-0.6
3,580,173	+		AO353_16145	0.37	-0.4
3,580,220	+		AO353_16145	0.40	+1.1
3,580,280	+		AO353_16145	0.44	-1.2
3,580,280	+		AO353_16145	0.44	-0.1
3,580,319	+		AO353_16145	0.46	+1.3
3,580,396	+		AO353_16145	0.51	-1.0
3,580,396	+		AO353_16145	0.51	+0.2
3,580,397	-		AO353_16145	0.51	+1.2
3,580,398	+		AO353_16145	0.51	-1.4
3,580,398	+		AO353_16145	0.51	-0.2
3,580,399	-		AO353_16145	0.51	-1.5
3,580,399	-		AO353_16145	0.51	+1.3
3,580,432	+		AO353_16145	0.54	-0.5
3,580,432	+		AO353_16145	0.54	-1.6
3,580,432	+		AO353_16145	0.54	-0.1
3,580,432	+		AO353_16145	0.54	+0.9
3,580,432	+		AO353_16145	0.54	-1.6
3,580,432	+		AO353_16145	0.54	+0.6
3,580,433	-		AO353_16145	0.54	-0.1
3,580,433	-		AO353_16145	0.54	+0.5
3,580,522	+		AO353_16145	0.59	-3.1
3,580,522	+		AO353_16145	0.59	-0.2
3,580,522	+		AO353_16145	0.59	-0.3
3,580,522	+		AO353_16145	0.59	-0.4
3,580,522	+		AO353_16145	0.59	+0.7
3,580,522	+		AO353_16145	0.59	-0.9
3,580,522	+		AO353_16145	0.59	+1.6
3,580,522	+		AO353_16145	0.59	+2.2
3,580,522	+		AO353_16145	0.59	+0.4
3,580,522	+		AO353_16145	0.59	-3.0
3,580,522	+		AO353_16145	0.59	-3.3
3,580,523	-		AO353_16145	0.60	+0.4
3,580,523	-		AO353_16145	0.60	-2.5
3,580,523	-		AO353_16145	0.60	+2.2
3,580,523	-		AO353_16145	0.60	-0.4
3,580,523	-		AO353_16145	0.60	-0.6
3,580,523	-		AO353_16145	0.60	-0.6
3,580,523	-		AO353_16145	0.60	-0.6
3,580,523	-		AO353_16145	0.60	+1.5
3,580,523	-		AO353_16145	0.60	+0.6
3,580,524	+		AO353_16145	0.60	+0.4
3,580,525	-		AO353_16145	0.60	+1.9
3,580,578	+		AO353_16145	0.63	+0.4
3,580,578	+		AO353_16145	0.63	+1.7
3,580,578	+		AO353_16145	0.63	+1.8
3,580,579	-		AO353_16145	0.63	-1.4
3,580,579	-		AO353_16145	0.63	+1.9
3,580,579	-		AO353_16145	0.63	-1.2
3,580,579	-		AO353_16145	0.63	-1.5
3,580,579	-		AO353_16145	0.63	-2.6
3,580,580	+		AO353_16145	0.63	+1.5
3,580,580	+		AO353_16145	0.63	+0.5
3,580,580	+		AO353_16145	0.63	-2.1
3,580,580	+		AO353_16145	0.63	+0.0
3,580,580	+		AO353_16145	0.63	-0.8
3,580,580	+		AO353_16145	0.63	-1.0
3,580,580	+		AO353_16145	0.63	-2.1
3,580,580	+		AO353_16145	0.63	+0.2
3,580,580	+		AO353_16145	0.63	+1.8
3,580,580	+		AO353_16145	0.63	+0.0
3,580,581	-		AO353_16145	0.63	+1.8
3,580,581	-		AO353_16145	0.63	+1.1
3,580,581	-		AO353_16145	0.63	-3.3
3,580,581	-		AO353_16145	0.63	-0.3
3,580,581	-		AO353_16145	0.63	+0.5
3,580,581	-		AO353_16145	0.63	-1.4
3,580,581	-		AO353_16145	0.63	-1.2
3,580,581	-		AO353_16145	0.63	+2.3
3,580,581	-		AO353_16145	0.63	-1.3
3,580,582	+		AO353_16145	0.63	+1.1
3,580,582	+		AO353_16145	0.63	-1.2
3,580,582	+		AO353_16145	0.63	-1.9
3,580,582	+		AO353_16145	0.63	+0.6
3,580,582	+		AO353_16145	0.63	-1.3
3,580,583	-		AO353_16145	0.63	-1.5