Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15010

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
3,316,479	+				+1.0
3,316,480	-				-0.3
3,316,491	+				-0.7
3,316,491	+				-1.4
3,316,492	-				-0.2
3,316,492	-				-0.3
3,316,492	-				-1.9
3,316,569	-				+1.3
3,316,643	+				-1.6
3,316,685	+				+0.9
3,316,686	-				-1.8
3,316,702	+				+1.3
3,316,702	+				+1.2
3,316,702	+				-0.3
3,316,702	+				-1.7
3,316,702	+				+2.6
3,316,702	+				-0.2
3,316,702	+				-1.0
3,316,702	+				+1.4
3,316,703	-				-0.8
3,316,703	-				-0.8
3,316,703	-				+0.4
3,316,703	-				-1.4
3,316,703	-				+1.2
3,316,703	-				-0.9
3,316,703	-				-3.1
3,316,703	-				+0.7
3,316,703	-				+0.9
3,316,864	+		AO353_15005	0.26	-0.2
3,316,942	+		AO353_15005	0.39	+1.0
3,316,943	-		AO353_15005	0.39	+1.1
3,316,943	-		AO353_15005	0.39	-1.1
3,316,951	+		AO353_15005	0.40	-0.4
3,316,951	+		AO353_15005	0.40	+1.6
3,316,951	+		AO353_15005	0.40	-2.4
3,316,952	-		AO353_15005	0.40	-1.0
3,316,952	-		AO353_15005	0.40	+0.4
3,317,046	+		AO353_15005	0.55	-0.1
3,317,046	+		AO353_15005	0.55	+0.0
3,317,047	-		AO353_15005	0.55	-0.9
3,317,164	+		AO353_15005	0.74	+1.3
3,317,165	-		AO353_15005	0.74	-1.8
3,317,165	-		AO353_15005	0.74	-2.7
3,317,165	-		AO353_15005	0.74	+0.4
3,317,165	-		AO353_15005	0.74	-0.3
3,317,362	-				-2.3
3,317,370	+				+1.2
3,317,371	-				+0.5
3,317,371	-				+0.3
3,317,371	-				+1.0
3,317,402	+				-1.7
3,317,402	+				+3.3
3,317,402	+				-1.0
3,317,403	-				+0.3
3,317,403	-				-1.0
3,317,403	-				-0.3
3,317,403	-				+0.8
3,317,403	-				-0.6
3,317,403	-				+0.0
3,317,422	+				-1.6
3,317,422	+				-2.4
3,317,423	-				+0.9
3,317,431	+				+0.9
3,317,431	+				-2.0
3,317,431	+				-0.9
3,317,432	-				-0.3
3,317,432	-				+1.1
3,317,432	-				-0.8
3,317,432	-				+0.4
3,317,432	-				+0.9
3,317,432	-				-0.8
3,317,432	-				+1.0
3,317,432	-				-1.5
3,317,461	+				+1.3
3,317,462	-				+0.4
3,317,462	-				-1.2
3,317,473	+				+1.5
3,317,473	+				-0.7
3,317,473	+				+1.0
3,317,473	+				+1.0
3,317,473	+				-2.3
3,317,473	+				+0.8
3,317,473	+				-1.4
3,317,473	+				+0.0
3,317,473	+				-1.4
3,317,473	+				-0.2
3,317,473	+				-2.2
3,317,473	+				-1.6
3,317,473	+				-2.5
3,317,473	+				-0.2
3,317,473	+				-0.4
3,317,473	+				+0.4
3,317,473	+				-1.3
3,317,473	+				-0.6
3,317,473	+				+0.7
3,317,474	-				-2.4
3,317,474	-				-0.4
3,317,474	-				+1.3
3,317,474	-				+0.5
3,317,474	-				-0.2
3,317,474	-				-1.7
3,317,474	-				-0.2
3,317,474	-				-0.1
3,317,474	-				+1.1
3,317,474	-				-0.8
3,317,474	-				-0.2
3,317,474	-				-1.9
3,317,474	-				-0.8
3,317,474	-				-1.1
3,317,474	-				-0.2
3,317,474	-				+0.3
3,317,474	-				-0.4
3,317,474	-				-0.1
3,317,474	-				+0.5
3,317,474	-				+0.2
3,317,474	-				-2.6
3,317,474	-				+0.8
3,317,492	-				-0.0
3,317,513	+				-0.4
3,317,513	+				+0.6
3,317,513	+				+0.9
3,317,513	+				-0.6
3,317,514	-				+0.6
3,317,604	-				-1.8
3,317,798	+		AO353_15010	0.19	-2.0
3,317,798	+		AO353_15010	0.19	-1.4
3,317,798	+		AO353_15010	0.19	+1.5
3,317,798	+		AO353_15010	0.19	-0.2
3,317,798	+		AO353_15010	0.19	-0.5
3,317,799	-		AO353_15010	0.19	+1.6
3,317,799	-		AO353_15010	0.19	-2.1
3,317,957	+		AO353_15010	0.29	+1.0
3,317,957	+		AO353_15010	0.29	-1.3
3,317,957	+		AO353_15010	0.29	-0.6
3,317,958	-		AO353_15010	0.29	-0.2
3,317,958	-		AO353_15010	0.29	-1.0
3,317,958	-		AO353_15010	0.29	-1.3
3,317,990	+		AO353_15010	0.31	+1.8
3,317,990	+		AO353_15010	0.31	-1.4
3,317,990	+		AO353_15010	0.31	-2.3
3,317,991	-		AO353_15010	0.31	+0.4
3,317,991	-				+1.0
3,318,035	+		AO353_15010	0.33	+1.2
3,318,035	+		AO353_15010	0.33	-2.2
3,318,035	+		AO353_15010	0.33	+1.4
3,318,035	+		AO353_15010	0.33	+0.5
3,318,035	+		AO353_15010	0.33	-2.2
3,318,036	-		AO353_15010	0.33	+0.1
3,318,036	-		AO353_15010	0.33	+1.5
3,318,036	-				+2.0
3,318,036	-		AO353_15010	0.33	-1.6
3,318,036	-		AO353_15010	0.33	+2.1
3,318,036	-		AO353_15010	0.33	-0.5
3,318,036	-		AO353_15010	0.33	+0.4
3,318,036	-		AO353_15010	0.33	-1.1
3,318,036	-		AO353_15010	0.33	+1.9
3,318,036	-		AO353_15010	0.33	+1.5
3,318,036	-		AO353_15010	0.33	+0.3
3,318,036	-		AO353_15010	0.33	-0.6
3,318,072	-		AO353_15010	0.36	+0.0
3,318,072	-		AO353_15010	0.36	-1.6
3,318,072	-		AO353_15010	0.36	-0.4
3,318,072	-		AO353_15010	0.36	-1.6
3,318,072	-		AO353_15010	0.36	-1.0
3,318,167	+		AO353_15010	0.41	+0.5
3,318,167	+		AO353_15010	0.41	+0.6
3,318,167	+		AO353_15010	0.41	-2.1
3,318,167	+		AO353_15010	0.41	+1.5
3,318,167	+		AO353_15010	0.41	+0.7
3,318,167	+		AO353_15010	0.41	+1.4
3,318,167	+		AO353_15010	0.41	-1.6
3,318,167	+		AO353_15010	0.41	+0.1
3,318,167	+		AO353_15010	0.41	+1.1
3,318,167	+		AO353_15010	0.41	-0.3
3,318,168	-		AO353_15010	0.41	+0.2
3,318,168	-		AO353_15010	0.41	-1.1
3,318,168	-		AO353_15010	0.41	+0.4
3,318,168	-		AO353_15010	0.41	-3.5
3,318,168	-		AO353_15010	0.41	+0.2
3,318,168	-		AO353_15010	0.41	-1.7
3,318,168	-		AO353_15010	0.41	+1.8
3,318,168	-		AO353_15010	0.41	-2.1
3,318,215	+		AO353_15010	0.44	+0.8
3,318,215	+		AO353_15010	0.44	-2.1
3,318,216	-		AO353_15010	0.44	+0.0
3,318,216	-		AO353_15010	0.44	-0.1
3,318,272	+		AO353_15010	0.47	-1.1
3,318,272	+		AO353_15010	0.47	-1.3
3,318,273	-		AO353_15010	0.47	-1.3
3,318,273	-		AO353_15010	0.47	-1.4
3,318,426	-		AO353_15010	0.57	-2.2
3,318,426	-		AO353_15010	0.57	+0.4
3,318,426	-		AO353_15010	0.57	-2.1
3,318,426	-		AO353_15010	0.57	+0.6
3,318,511	+		AO353_15010	0.62	-1.1
3,318,512	-		AO353_15010	0.62	-0.3
3,318,554	+		AO353_15010	0.64	+1.0
3,318,554	+		AO353_15010	0.64	-1.4
3,318,555	-		AO353_15010	0.64	-0.3
3,318,555	-		AO353_15010	0.64	+0.1
3,318,686	+		AO353_15010	0.72	-0.2
3,318,686	+		AO353_15010	0.72	+0.0
3,318,686	+		AO353_15010	0.72	+2.3
3,318,686	+		AO353_15010	0.72	-1.7
3,318,686	+		AO353_15010	0.72	+1.1
3,318,687	-		AO353_15010	0.72	+0.1
3,318,687	-		AO353_15010	0.72	-0.0
3,318,882	+		AO353_15010	0.84	+1.8
3,318,882	+		AO353_15010	0.84	+0.4
3,318,882	+		AO353_15010	0.84	-0.8
3,318,882	+		AO353_15010	0.84	-0.3
3,318,883	-		AO353_15010	0.84	-1.1
3,318,883	-		AO353_15010	0.84	-0.8
3,318,883	-		AO353_15010	0.84	+0.8
3,318,883	-		AO353_15010	0.84	+0.6
3,318,883	-		AO353_15010	0.84	+0.5
3,318,883	-		AO353_15010	0.84	+0.8
3,318,961	-		AO353_15010	0.88	+0.3
3,318,961	-		AO353_15010	0.88	-0.0
3,319,096	+				-1.4
3,319,154	+				+0.3
3,319,155	-				+0.1
3,319,155	-				-0.6
3,319,155	-				+0.9
3,319,155	-				-0.6
3,319,155	-				-0.3
3,319,155	-				-2.4
3,319,155	-				+1.8
3,319,155	-				+2.8
3,319,217	+				-1.1
3,319,217	+				-1.8
3,319,308	+				-0.1
3,319,309	-				-0.2
3,319,309	-				+0.4
3,319,324	+				+0.5
3,319,324	+				-0.3
3,319,324	+				-0.1
3,319,325	-				-1.3
3,319,325	-				-1.3
3,319,325	-				-0.3
3,319,327	+				-0.8
3,319,327	+				-1.3
3,319,327	+				-1.2
3,319,327	+				-1.0
3,319,327	+				-1.1
3,319,328	-				-0.1
3,319,328	-				+0.6
3,319,328	-				+0.5
3,319,328	-				+0.8
3,319,328	-				+1.9
3,319,339	-				+1.2
3,319,340	+				+0.4
3,319,340	+				-0.1
3,319,340	+				-1.7
3,319,341	-				-2.1
3,319,341	-				+1.1
3,319,341	-				-1.1
3,319,446	+				+0.4
3,319,447	-				-1.3
3,319,464	+				+0.0
3,319,465	-				+0.2
3,319,470	+				+1.2
3,319,470	+				+1.3
3,319,470	+				-2.6
3,319,470	+				-1.7
3,319,470	+				-0.3
3,319,470	+				+0.0
3,319,471	-				-1.0
3,319,471	-				-1.7
3,319,471	-				-0.8
3,319,471	-				-0.4
3,319,471	-				-0.3
3,319,471	-				-1.3
3,319,471	-				-1.6
3,319,471	-				+0.4
3,319,484	+				+1.4
3,319,485	-				-0.3
3,319,502	+				-0.5
3,319,502	+				-1.3
3,319,502	+				+4.1
3,319,502	+				-1.2
3,319,502	+				-1.1
3,319,503	-				-0.8
3,319,554	+				-1.6
3,319,554	+				-0.8
3,319,554	+				+1.4
3,319,555	-				+1.0
3,319,555	-				+2.0
3,319,555	-				+0.4
3,319,555	-				+1.6
3,319,647	+				-1.4
3,319,792	+		AO353_15015	0.16	+0.4
3,319,793	-		AO353_15015	0.16	+1.3
3,319,821	+		AO353_15015	0.17	-2.7
3,319,822	-		AO353_15015	0.17	+1.8
3,319,825	+		AO353_15015	0.18	-1.6
3,319,825	+		AO353_15015	0.18	+0.6
3,319,825	+		AO353_15015	0.18	+1.5
3,319,825	+		AO353_15015	0.18	-1.1
3,319,825	+		AO353_15015	0.18	-0.1
3,319,825	+		AO353_15015	0.18	-1.4
3,319,825	+		AO353_15015	0.18	-0.6
3,319,825	+		AO353_15015	0.18	+1.7
3,319,825	+		AO353_15015	0.18	+0.2
3,319,825	+		AO353_15015	0.18	-1.4
3,319,825	+		AO353_15015	0.18	+1.1
3,319,826	-		AO353_15015	0.18	+2.9
3,319,826	-		AO353_15015	0.18	-0.6
3,319,826	-		AO353_15015	0.18	-1.4
3,319,826	-		AO353_15015	0.18	-1.1
3,319,879	-		AO353_15015	0.20	+0.6
3,319,879	-		AO353_15015	0.20	-0.2
3,319,939	+		AO353_15015	0.24	-0.6
3,319,948	+		AO353_15015	0.24	+0.2
3,319,948	+		AO353_15015	0.24	+0.9
3,319,948	+		AO353_15015	0.24	+1.0
3,319,948	+		AO353_15015	0.24	+1.1
3,319,948	+		AO353_15015	0.24	-2.0
3,319,948	+		AO353_15015	0.24	+0.4
3,319,948	+		AO353_15015	0.24	-1.8
3,319,948	+		AO353_15015	0.24	-2.2
3,319,948	+		AO353_15015	0.24	-1.3
3,319,948	+		AO353_15015	0.24	+1.5
3,319,948	+		AO353_15015	0.24	-1.6
3,319,948	+		AO353_15015	0.24	+0.5
3,319,949	-		AO353_15015	0.24	-2.4
3,319,949	-		AO353_15015	0.24	-0.4
3,319,949	-		AO353_15015	0.24	+0.4
3,319,949	-		AO353_15015	0.24	+1.6
3,319,949	-		AO353_15015	0.24	-1.2
3,319,949	-		AO353_15015	0.24	+0.6
3,319,949	-		AO353_15015	0.24	+2.6
3,320,013	+		AO353_15015	0.28	+1.3
3,320,013	+		AO353_15015	0.28	+4.4
3,320,013	+		AO353_15015	0.28	+0.2
3,320,014	-		AO353_15015	0.28	+2.0
3,320,014	-		AO353_15015	0.28	-0.8
3,320,014	-		AO353_15015	0.28	-1.9
3,320,014	-		AO353_15015	0.28	-1.0
3,320,014	-		AO353_15015	0.28	+1.0
3,320,014	-		AO353_15015	0.28	+1.9
3,320,014	-		AO353_15015	0.28	+1.1
3,320,014	-		AO353_15015	0.28	+1.7
3,320,119	+		AO353_15015	0.33	+1.4
3,320,119	+		AO353_15015	0.33	+0.0
3,320,119	+		AO353_15015	0.33	-2.7
3,320,119	+		AO353_15015	0.33	+1.0
3,320,119	+		AO353_15015	0.33	-0.8
3,320,119	+		AO353_15015	0.33	+0.0
3,320,120	-		AO353_15015	0.33	+0.4
3,320,120	-		AO353_15015	0.33	+0.2
3,320,120	-		AO353_15015	0.33	+1.4
3,320,120	-		AO353_15015	0.33	-1.4
3,320,120	-		AO353_15015	0.33	-0.4
3,320,120	-		AO353_15015	0.33	-2.9
3,320,120	-		AO353_15015	0.33	+3.5
3,320,120	-		AO353_15015	0.33	-0.0
3,320,120	-		AO353_15015	0.33	-0.6
3,320,120	-		AO353_15015	0.33	+2.1
3,320,120	-		AO353_15015	0.33	+1.4