Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04975

Experiment: Minimal media pH9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Minimal media pH9
1,095,396	+		AO353_04970	0.46	-0.5
1,095,397	-		AO353_04970	0.47	-0.6
1,095,397	-		AO353_04970	0.47	-0.2
1,095,397	-		AO353_04970	0.47	+1.1
1,095,459	+		AO353_04970	0.68	+1.0
1,095,472	-		AO353_04970	0.72	+1.4
1,095,472	-		AO353_04970	0.72	+1.6
1,095,492	+		AO353_04970	0.79	-1.0
1,095,552	+				+2.4
1,095,582	-				-0.8
1,095,582	-				-2.6
1,095,582	-				-0.5
1,095,587	+				-3.1
1,095,587	+				-0.4
1,095,587	+				-2.4
1,095,588	-				+0.9
1,095,588	-				-1.2
1,095,601	+				-0.8
1,095,602	-				-0.7
1,095,602	-				-1.8
1,095,602	-				+2.6
1,095,625	+				+0.3
1,095,625	+				+1.0
1,095,625	+				-1.3
1,095,626	-				-2.5
1,095,626	-				-0.1
1,095,626	-				-0.0
1,095,626	-				-1.2
1,095,626	-				-1.5
1,095,626	-				-0.8
1,095,645	+				-1.2
1,095,645	+				+0.3
1,095,646	-				-2.4
1,095,646	-				+0.4
1,095,735	+				-0.2
1,095,735	+				-1.0
1,095,735	+				+0.4
1,095,735	+				+0.8
1,095,791	-				-1.5
1,095,809	+				-0.3
1,095,810	-				-1.6
1,095,810	-				+3.7
1,095,834	+				-3.4
1,095,834	+				-2.7
1,095,835	-				+1.4
1,095,851	-				+0.2
1,095,979	+				-0.4
1,095,979	+				-1.0
1,095,980	-				-1.3
1,095,980	-				+1.1
1,095,980	-				-0.5
1,095,980	-				-1.8
1,095,982	+				+1.5
1,095,982	+				+0.1
1,095,982	+				-1.8
1,095,982	+				-1.9
1,095,982	+				-1.3
1,095,982	+				-1.2
1,095,982	+				-0.8
1,095,982	+				-1.9
1,095,982	+				+0.6
1,095,982	+				+0.2
1,095,982	+				-1.7
1,095,983	-				-0.7
1,095,983	-				+1.0
1,096,009	+				+1.1
1,096,009	+				+2.3
1,096,009	+				+0.1
1,096,009	+				+0.8
1,096,009	+				+0.9
1,096,010	-				-0.8
1,096,010	-				-0.8
1,096,010	-				-1.6
1,096,010	-				-2.0
1,096,010	-				+0.5
1,096,010	-				-2.4
1,096,224	+				-0.3
1,096,224	+				+0.4
1,096,224	+				+1.4
1,096,224	+				-2.6
1,096,224	+				-1.5
1,096,224	+				-2.9
1,096,225	-				+0.1
1,096,225	-				+1.2
1,096,225	-				-0.8
1,096,225	-				-2.4
1,096,225	-				-0.6
1,096,225	-				+0.8
1,096,226	+				+0.4
1,096,226	+				+0.1
1,096,227	-				+2.0
1,096,235	+				-1.2
1,096,236	-				+2.0
1,096,236	-				+0.4
1,096,236	-				+0.2
1,096,236	-				+0.2
1,096,237	+				-1.3
1,096,261	+				-1.6
1,096,388	+		AO353_04975	0.11	+0.3
1,096,388	+		AO353_04975	0.11	+1.7
1,096,389	-		AO353_04975	0.12	+2.6
1,096,408	+		AO353_04975	0.14	+3.0
1,096,409	-		AO353_04975	0.14	+3.3
1,096,412	+		AO353_04975	0.14	-2.3
1,096,412	+		AO353_04975	0.14	+1.2
1,096,412	+		AO353_04975	0.14	-1.3
1,096,412	+		AO353_04975	0.14	-0.3
1,096,412	+		AO353_04975	0.14	+2.3
1,096,412	+		AO353_04975	0.14	-0.0
1,096,413	-		AO353_04975	0.14	-0.6
1,096,413	-		AO353_04975	0.14	+2.3
1,096,413	-		AO353_04975	0.14	-0.9
1,096,454	+		AO353_04975	0.19	+1.7
1,096,454	+		AO353_04975	0.19	-1.8
1,096,455	-		AO353_04975	0.19	-3.0
1,096,455	-		AO353_04975	0.19	+1.8
1,096,494	+		AO353_04975	0.24	-2.0
1,096,495	-		AO353_04975	0.24	+1.7
1,096,495	-		AO353_04975	0.24	-0.8
1,096,497	+		AO353_04975	0.24	+1.2
1,096,497	+		AO353_04975	0.24	-3.3
1,096,497	+		AO353_04975	0.24	-1.2
1,096,498	-		AO353_04975	0.24	+0.2
1,096,498	-		AO353_04975	0.24	+0.2
1,096,559	-		AO353_04975	0.31	-0.6
1,096,559	-		AO353_04975	0.31	+0.4
1,096,559	-		AO353_04975	0.31	-1.3
1,096,565	+		AO353_04975	0.32	-0.6
1,096,565	+		AO353_04975	0.32	-0.2
1,096,565	+		AO353_04975	0.32	+1.4
1,096,565	+		AO353_04975	0.32	+1.6
1,096,565	+		AO353_04975	0.32	+1.3
1,096,565	+		AO353_04975	0.32	+0.6
1,096,565	+		AO353_04975	0.32	-0.8
1,096,565	+		AO353_04975	0.32	-1.6
1,096,565	+		AO353_04975	0.32	-2.0
1,096,565	+		AO353_04975	0.32	-0.7
1,096,565	+		AO353_04975	0.32	+1.4
1,096,566	-		AO353_04975	0.32	-0.1
1,096,566	-		AO353_04975	0.32	-1.7
1,096,566	-		AO353_04975	0.32	+1.4
1,096,566	-		AO353_04975	0.32	+0.1
1,096,566	-		AO353_04975	0.32	+1.1
1,096,566	-		AO353_04975	0.32	+0.6
1,096,566	-		AO353_04975	0.32	-1.5
1,096,593	+		AO353_04975	0.35	-1.6
1,096,593	+		AO353_04975	0.35	-0.6
1,096,593	+		AO353_04975	0.35	+0.7
1,096,593	+		AO353_04975	0.35	+0.7
1,096,593	+		AO353_04975	0.35	+2.5
1,096,593	+		AO353_04975	0.35	+1.4
1,096,594	-		AO353_04975	0.35	+0.1
1,096,594	-		AO353_04975	0.35	+1.1
1,096,594	-		AO353_04975	0.35	-3.4
1,096,594	-		AO353_04975	0.35	+1.4
1,096,594	-		AO353_04975	0.35	-0.4
1,096,616	+		AO353_04975	0.38	-2.0
1,096,616	+		AO353_04975	0.38	-1.0
1,096,616	+		AO353_04975	0.38	+0.3
1,096,616	+		AO353_04975	0.38	-2.7
1,096,616	+		AO353_04975	0.38	-2.5
1,096,616	+		AO353_04975	0.38	+1.4
1,096,616	+		AO353_04975	0.38	+1.2
1,096,616	+		AO353_04975	0.38	-0.4
1,096,616	+		AO353_04975	0.38	+1.8
1,096,616	+		AO353_04975	0.38	-0.6
1,096,616	+		AO353_04975	0.38	+0.1
1,096,616	+		AO353_04975	0.38	-2.3
1,096,616	+		AO353_04975	0.38	+2.0
1,096,617	-		AO353_04975	0.38	+1.0
1,096,617	-		AO353_04975	0.38	+0.6
1,096,617	-		AO353_04975	0.38	+3.2
1,096,617	-		AO353_04975	0.38	-1.9
1,096,617	-		AO353_04975	0.38	-1.2
1,096,617	-		AO353_04975	0.38	-0.8
1,096,617	-		AO353_04975	0.38	+2.1
1,096,617	-		AO353_04975	0.38	+0.3
1,096,617	-		AO353_04975	0.38	+0.4
1,096,617	-		AO353_04975	0.38	-2.9
1,096,617	-		AO353_04975	0.38	-1.0
1,096,617	-		AO353_04975	0.38	-1.0
1,096,617	-		AO353_04975	0.38	-2.3
1,096,617	-		AO353_04975	0.38	+0.1
1,096,653	-		AO353_04975	0.42	-0.3
1,096,653	-		AO353_04975	0.42	+1.6
1,096,653	-		AO353_04975	0.42	-1.2
1,096,744	-		AO353_04975	0.53	+0.9
1,096,759	+		AO353_04975	0.54	+1.8
1,096,913	+		AO353_04975	0.72	+0.7
1,096,913	+		AO353_04975	0.72	-1.5
1,096,913	+		AO353_04975	0.72	+0.3
1,096,913	+		AO353_04975	0.72	+2.3
1,096,913	+		AO353_04975	0.72	-0.7
1,096,913	+		AO353_04975	0.72	-0.2
1,096,913	+		AO353_04975	0.72	+2.6
1,096,913	+		AO353_04975	0.72	-1.8
1,096,914	-		AO353_04975	0.72	-1.7
1,096,914	-		AO353_04975	0.72	+0.4
1,096,914	-		AO353_04975	0.72	+1.0
1,096,914	-		AO353_04975	0.72	+1.5
1,096,914	-		AO353_04975	0.72	+0.2
1,096,914	-				-0.3
1,096,914	-		AO353_04975	0.72	-1.3
1,096,914	-		AO353_04975	0.72	+1.0
1,096,914	-		AO353_04975	0.72	+1.3
1,097,035	+		AO353_04975	0.86	+0.1
1,097,035	+		AO353_04975	0.86	-0.4
1,097,035	+		AO353_04975	0.86	+0.3
1,097,035	+		AO353_04975	0.86	+2.4
1,097,036	-		AO353_04975	0.86	-2.0
1,097,085	+				+2.2
1,097,086	-				+0.2
1,097,123	+				+1.1
1,097,123	+				-1.3
1,097,124	-				+0.5
1,097,124	-				-0.0
1,097,124	-				-1.6
1,097,124	-				-3.0
1,097,249	+		AO353_04980	0.17	-1.5
1,097,249	+		AO353_04980	0.17	+1.6
1,097,249	+		AO353_04980	0.17	-0.5
1,097,249	+		AO353_04980	0.17	-1.3
1,097,249	+		AO353_04980	0.17	+0.1
1,097,249	+		AO353_04980	0.17	-1.7
1,097,249	+		AO353_04980	0.17	+1.9
1,097,250	-				+1.0
1,097,250	-		AO353_04980	0.17	-1.3
1,097,250	-		AO353_04980	0.17	-1.0
1,097,250	-		AO353_04980	0.17	+0.4
1,097,250	-		AO353_04980	0.17	-1.5
1,097,250	-		AO353_04980	0.17	-1.3
1,097,293	+		AO353_04980	0.28	-2.1
1,097,294	-		AO353_04980	0.28	+3.6
1,097,294	-		AO353_04980	0.28	+2.6
1,097,294	-		AO353_04980	0.28	-0.6
1,097,294	-		AO353_04980	0.28	-0.5
1,097,396	+		AO353_04980	0.55	+0.4
1,097,396	+		AO353_04980	0.55	-1.6
1,097,411	+		AO353_04980	0.58	+1.0
1,097,411	+		AO353_04980	0.58	-1.9
1,097,411	+		AO353_04980	0.58	-0.8
1,097,412	-		AO353_04980	0.59	+0.9
1,097,412	-		AO353_04980	0.59	-0.2
1,097,412	-		AO353_04980	0.59	+0.2
1,097,412	-		AO353_04980	0.59	+0.2
1,097,412	-		AO353_04980	0.59	-2.5
1,097,412	-		AO353_04980	0.59	-2.3
1,097,413	+		AO353_04980	0.59	-0.8
1,097,413	+		AO353_04980	0.59	-1.9
1,097,413	+		AO353_04980	0.59	-1.7
1,097,413	+		AO353_04980	0.59	-1.3
1,097,413	+		AO353_04980	0.59	-1.4
1,097,413	+		AO353_04980	0.59	+2.5
1,097,413	+		AO353_04980	0.59	-1.6
1,097,413	+		AO353_04980	0.59	-0.8
1,097,413	+		AO353_04980	0.59	-1.3
1,097,413	+		AO353_04980	0.59	-0.3
1,097,413	+		AO353_04980	0.59	-2.2
1,097,413	+		AO353_04980	0.59	+1.3
1,097,414	-		AO353_04980	0.59	+2.1
1,097,414	-		AO353_04980	0.59	+1.8
1,097,414	-		AO353_04980	0.59	+2.7
1,097,414	-		AO353_04980	0.59	-1.6
1,097,414	-		AO353_04980	0.59	-1.2
1,097,414	-		AO353_04980	0.59	-0.0
1,097,414	-		AO353_04980	0.59	+0.7
1,097,417	+		AO353_04980	0.60	-2.3
1,097,417	+		AO353_04980	0.60	+2.3
1,097,417	+		AO353_04980	0.60	-0.8
1,097,417	+		AO353_04980	0.60	-0.2
1,097,417	+		AO353_04980	0.60	-0.3
1,097,417	+		AO353_04980	0.60	-2.7
1,097,417	+		AO353_04980	0.60	+0.7
1,097,417	+		AO353_04980	0.60	+0.9
1,097,417	+		AO353_04980	0.60	-1.3
1,097,418	-		AO353_04980	0.60	-1.2
1,097,418	-		AO353_04980	0.60	-0.3
1,097,418	-		AO353_04980	0.60	-0.6
1,097,418	-		AO353_04980	0.60	+0.7
1,097,418	-		AO353_04980	0.60	+0.5
1,097,418	-		AO353_04980	0.60	-1.2
1,097,418	-		AO353_04980	0.60	-0.6
1,097,418	-		AO353_04980	0.60	+2.0
1,097,418	-		AO353_04980	0.60	-2.0
1,097,418	-		AO353_04980	0.60	-1.6
1,097,418	-		AO353_04980	0.60	+1.4
1,097,434	+		AO353_04980	0.64	+0.5
1,097,434	+		AO353_04980	0.64	-0.8
1,097,434	+		AO353_04980	0.64	+1.5
1,097,434	+		AO353_04980	0.64	-2.8
1,097,434	+		AO353_04980	0.64	-2.5
1,097,434	+		AO353_04980	0.64	+0.7
1,097,434	+		AO353_04980	0.64	+0.6
1,097,434	+		AO353_04980	0.64	+0.9
1,097,434	+		AO353_04980	0.64	-2.5
1,097,434	+		AO353_04980	0.64	+1.7
1,097,434	+		AO353_04980	0.64	-1.3
1,097,435	-		AO353_04980	0.65	-2.9
1,097,435	-		AO353_04980	0.65	-1.5
1,097,435	-		AO353_04980	0.65	+1.7
1,097,435	-		AO353_04980	0.65	+1.5
1,097,435	-		AO353_04980	0.65	+0.4
1,097,435	-		AO353_04980	0.65	-1.3
1,097,435	-		AO353_04980	0.65	+3.5
1,097,435	-		AO353_04980	0.65	-0.8
1,097,435	-		AO353_04980	0.65	-2.3
1,097,435	-		AO353_04980	0.65	+1.4
1,097,435	-		AO353_04980	0.65	-3.0
1,097,435	-		AO353_04980	0.65	-0.0
1,097,513	+		AO353_04980	0.85	-0.8
1,097,513	+		AO353_04980	0.85	+1.5
1,097,513	+		AO353_04980	0.85	-0.0
1,097,521	-		AO353_04980	0.87	-2.0
1,097,569	+				+2.1
1,097,569	+				+0.4
1,097,569	+				+1.0
1,097,569	+				-2.3
1,097,569	+				-1.7
1,097,570	-				+2.8
1,097,570	-				-2.8
1,097,570	-				+0.3
1,097,573	+				+2.0
1,097,573	+				+1.3
1,097,573	+				-0.3
1,097,574	-				+1.0
1,097,574	-				+0.1
1,097,574	-				+0.4
1,097,574	-				+1.0
1,097,672	+				+3.0
1,097,673	-				-0.8
1,097,727	-				+0.8
1,097,727	-				-0.9
1,097,727	-				-2.0
1,097,731	-				+1.8
1,097,731	-				-2.3
1,097,731	-				+2.1
1,097,731	-				-0.8
1,097,731	-				+0.3
1,097,731	-				+0.5
1,097,731	-				+1.5
1,097,731	-				-2.0
1,097,731	-				-2.2
1,097,731	-				+0.7
1,097,731	-				-1.6
1,097,731	-				-2.5
1,097,731	-				+1.0
1,097,751	+				+0.7
1,097,751	+				+1.5
1,097,755	+				+0.6
1,097,755	+				-1.0
1,097,755	+				-1.9
1,097,755	+				+0.8
1,097,755	+				-1.8
1,097,755	+				+0.1
1,097,755	+				-0.3
1,097,755	+				+0.3
1,097,755	+				+0.4
1,097,755	+				-2.6
1,097,755	+				+1.4
1,097,755	+				+1.0
1,097,755	+				-2.2
1,097,755	+				-2.9
1,097,770	+				+0.4
1,097,846	+				+2.0
1,097,846	+				+1.0
1,097,847	-				+1.0
1,097,847	-				-2.3
1,097,847	-				-1.7
1,097,857	+				-0.6
1,097,857	+				-2.2
1,097,857	+				+1.4
1,097,858	-				+0.9
1,097,858	-				-2.3
1,097,858	-				+0.2
1,097,858	-				+1.0
1,097,858	-				-0.4
1,097,858	-				-0.3
1,097,872	+				-1.6
1,097,873	-				-2.0
1,097,873	-				-2.1
1,097,884	+				-1.9
1,097,884	+				-0.5
1,097,884	+				+2.7
1,097,885	-				+2.0
1,097,885	-				+0.1
1,097,885	-				+0.3
1,097,956	-		AO353_04985	0.11	+0.6
1,097,956	-		AO353_04985	0.11	+1.1
1,098,015	+		AO353_04985	0.15	-1.3
1,098,015	+		AO353_04985	0.15	-0.9
1,098,015	+		AO353_04985	0.15	-1.9
1,098,015	+		AO353_04985	0.15	-0.4
1,098,015	+		AO353_04985	0.15	-0.0
1,098,016	-		AO353_04985	0.15	-0.3
1,098,016	-		AO353_04985	0.15	+0.8
1,098,016	-		AO353_04985	0.15	-0.3
1,098,093	+		AO353_04985	0.20	-1.6