Strain Fitness in Shewanella loihica PV-4 around Shew_3837

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,565,272	-		Shew_3834	0.67	-0.3
4,565,309	+				-1.3
4,565,338	-				+0.3
4,565,355	+				+0.1
4,565,363	-				+0.3
4,565,363	-				+0.0
4,565,422	+				+0.3
4,565,430	-				-0.6
4,565,432	-				-0.6
4,565,452	+				-0.6
4,565,500	-				-0.2
4,565,582	+				-0.6
4,565,649	+		Shew_3835	0.14	-1.0
4,565,649	+		Shew_3835	0.14	+0.7
4,565,649	+		Shew_3835	0.14	-0.2
4,565,649	+		Shew_3835	0.14	-0.2
4,565,649	+		Shew_3835	0.14	-0.1
4,565,657	-		Shew_3835	0.19	-0.3
4,565,657	-		Shew_3835	0.19	+0.3
4,565,657	-		Shew_3835	0.19	+0.0
4,565,672	-		Shew_3835	0.27	+0.4
4,565,677	-		Shew_3835	0.30	-1.9
4,565,724	+		Shew_3835	0.56	+0.1
4,565,745	+		Shew_3835	0.68	-0.4
4,565,745	+		Shew_3835	0.68	+0.2
4,565,753	-		Shew_3835	0.73	+0.8
4,565,826	+				-0.3
4,565,826	+				+0.1
4,565,826	+				+0.3
4,565,826	+				+0.0
4,565,826	+				+0.6
4,565,834	-				-0.5
4,565,866	-				-0.3
4,566,006	+		Shew_3836	0.41	+0.2
4,566,037	-		Shew_3836	0.50	-0.3
4,566,148	-		Shew_3836	0.81	+0.4
4,566,186	+				+0.5
4,566,186	+				+0.1
4,566,186	+				+0.3
4,566,194	-				-0.0
4,566,194	-				+0.3
4,566,194	-				+1.5
4,566,208	+				-0.2
4,566,208	+				+0.2
4,566,261	-		Shew_3837	0.16	+0.7
4,566,270	+		Shew_3837	0.19	-0.7
4,566,372	+		Shew_3837	0.50	-1.1
4,566,494	+		Shew_3837	0.88	-0.2
4,566,702	-				+0.7
4,566,724	+				-0.0
4,566,747	+				-0.1
4,566,792	-		Shew_3838	0.11	+0.4
4,567,069	-		Shew_3838	0.39	+0.7
4,567,081	+		Shew_3838	0.40	-0.8
4,567,091	+		Shew_3838	0.41	+0.5
4,567,099	-		Shew_3838	0.42	-1.8
4,567,237	+		Shew_3838	0.56	+0.7
4,567,270	+		Shew_3838	0.59	+0.3
4,567,326	-		Shew_3838	0.65	+0.1
4,567,461	-		Shew_3838	0.79	-1.4
4,567,462	-		Shew_3838	0.79	-0.7