Strain Fitness in Shewanella loihica PV-4 around Shew_3723

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,429,993	+		Shew_3722	0.68	+0.2
4,429,994	+		Shew_3722	0.68	+0.0
4,430,129	+		Shew_3722	0.75	+0.3
4,430,978	-		Shew_3723	0.31	-1.4
4,430,997	-		Shew_3723	0.32	-0.7
4,431,037	+		Shew_3723	0.36	-0.4
4,431,480	-		Shew_3723	0.81	-0.0
4,431,571	-				-0.4
4,431,766	+				+0.2
4,431,766	+				+0.4
4,431,766	+				-0.0
4,431,774	-				+0.1
4,431,774	-				+0.2
4,431,774	-				+0.0
4,431,774	-				+0.4
4,431,954	+		Shew_3724	0.12	-0.7
4,432,136	-		Shew_3724	0.19	-0.1
4,432,245	-		Shew_3724	0.24	-0.2
4,432,272	+		Shew_3724	0.25	+1.5
4,432,316	+		Shew_3724	0.27	+0.0
4,432,443	-		Shew_3724	0.32	-0.3
4,432,478	-		Shew_3724	0.33	+0.4
4,432,525	-		Shew_3724	0.35	+0.5