Strain Fitness in Shewanella loihica PV-4 around Shew_3539

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,227,456	-		Shew_3537	0.17	-2.0
4,227,474	+		Shew_3537	0.22	+0.6
4,227,728	+		Shew_3537	0.84	+0.2
4,227,758	-				-0.1
4,227,794	+				+0.1
4,227,794	+				+0.5
4,227,794	+				+0.4
4,227,814	+				-0.2
4,227,879	-				+0.3
4,227,935	-				+0.8
4,227,938	-				+0.0
4,227,986	+		Shew_3538	0.20	-0.1
4,228,082	+		Shew_3538	0.42	+0.2
4,228,092	+		Shew_3538	0.44	+0.1
4,228,237	-		Shew_3538	0.77	-0.1
4,228,262	-		Shew_3538	0.83	-0.8
4,228,477	-				-0.1
4,228,638	-		Shew_3539	0.35	-0.3
4,228,844	+		Shew_3539	0.74	-0.5
4,229,188	-				+0.0
4,229,199	-				+0.1
4,229,199	-				+0.0
4,229,326	+				-0.1
4,229,334	-				+0.4
4,229,334	-				-1.0
4,229,334	-				+0.6
4,229,334	-				+0.3
4,229,361	+				-0.4
4,229,383	+		Shew_3540	0.11	+0.0
4,229,397	+		Shew_3540	0.14	+0.7
4,229,448	-		Shew_3540	0.23	+0.1
4,229,530	+		Shew_3540	0.37	-0.1
4,229,729	-		Shew_3540	0.73	+0.3
4,229,753	+		Shew_3540	0.77	+0.1
4,229,759	+		Shew_3540	0.78	+0.5
4,229,826	+				-0.4
4,229,836	+				-0.0
4,229,844	-				-0.4