Strain Fitness in Shewanella loihica PV-4 around Shew_3250

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,886,740	-		Shew_3249	0.51	+0.7
3,886,960	-		Shew_3249	0.64	-0.5
3,887,105	+		Shew_3249	0.73	+0.5
3,887,201	-		Shew_3249	0.79	-1.0
3,887,380	+		Shew_3249	0.90	-0.4
3,887,567	-				+0.4
3,887,667	+				+0.2
3,887,677	+				+0.3
3,887,705	-		Shew_3250	0.12	+0.3
3,887,766	+		Shew_3250	0.17	+0.3
3,887,894	-		Shew_3250	0.28	-0.1
3,887,910	+		Shew_3250	0.29	+0.2
3,887,937	-		Shew_3250	0.31	+2.1
3,888,271	-		Shew_3250	0.58	+0.3
3,888,394	-		Shew_3250	0.68	+0.2
3,888,450	-		Shew_3250	0.73	+0.9
3,888,713	+				-1.3
3,888,921	-				-0.1
3,888,938	-				+0.2
3,889,341	-		Shew_3251	0.55	-0.3
3,889,540	-		Shew_3251	0.79	-0.1
3,889,703	+				+0.7