Strain Fitness in Shewanella loihica PV-4 around Shew_2979

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,533,218	+		Shew_2978	0.72	+0.8
3,533,257	-		Shew_2978	0.77	+0.3
3,533,436	+				-0.8
3,533,441	+				-1.7
3,533,466	+				-0.3
3,533,555	+				+0.2
3,533,623	-				+0.4
3,533,830	+				+0.7
3,533,936	+				-1.2
3,533,944	-				+0.9
3,533,944	-				+0.2
3,534,103	-		Shew_2979	0.21	-0.5
3,534,478	-		Shew_2979	0.53	+0.1
3,534,595	+		Shew_2979	0.63	-0.9
3,534,649	-		Shew_2979	0.67	-1.1
3,535,012	+				-0.2
3,535,301	-		Shew_2980	0.31	+0.9
3,535,301	-		Shew_2980	0.31	+0.1
3,535,329	-		Shew_2980	0.45	-0.1
3,535,431	-				-0.1
3,535,481	-				+0.2
3,535,552	-				+0.4
3,535,698	+				+0.2
3,535,985	-		Shew_2981	0.21	+1.1