Strain Fitness in Shewanella loihica PV-4 around Shew_1643

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,881,581	-		Shew_1642	0.72	+0.3
1,881,638	+		Shew_1642	0.74	-1.6
1,881,646	-		Shew_1642	0.74	+1.3
1,881,646	-		Shew_1642	0.74	+0.2
1,881,717	-		Shew_1642	0.77	+0.6
1,882,082	-		Shew_1642	0.89	-0.5
1,882,170	-				+0.7
1,882,726	+				-0.0
1,883,529	+		Shew_1643	0.44	+0.5
1,883,547	+		Shew_1643	0.45	-0.6
1,883,555	-		Shew_1643	0.46	-0.1
1,883,681	+		Shew_1643	0.51	+0.9
1,883,800	-		Shew_1643	0.56	+0.2
1,884,029	+		Shew_1643	0.66	-0.1
1,884,040	+		Shew_1643	0.67	+0.1
1,884,040	+		Shew_1643	0.67	+0.5
1,884,048	-		Shew_1643	0.67	-0.2
1,884,048	-		Shew_1643	0.67	-0.7
1,884,245	+		Shew_1643	0.76	+0.1
1,884,327	-		Shew_1643	0.79	+1.2
1,884,349	+		Shew_1643	0.80	+0.2
1,884,415	-		Shew_1643	0.83	+0.4
1,884,647	-				-1.7
1,884,714	+				+0.4
1,884,750	-				+0.1
1,884,759	+				+0.7
1,884,767	-				+0.0
1,885,260	+				-0.7
1,885,349	-				+0.1
1,885,431	-		Shew_1644	0.10	+1.8