Strain Fitness in Shewanella loihica PV-4 around Shew_1318

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,530,329	-		Shew_1317	0.88	+0.1
1,530,329	-		Shew_1317	0.88	+0.3
1,530,331	+		Shew_1317	0.88	+0.5
1,530,340	+		Shew_1317	0.89	+0.7
1,530,348	-		Shew_1317	0.89	-0.1
1,530,453	+				+0.3
1,530,453	+				+0.3
1,530,474	-				+0.7
1,530,537	-				-1.2
1,530,554	+				+1.2
1,530,554	+				-0.3
1,530,554	+				-1.5
1,530,554	+				-0.4
1,530,554	+				+0.1
1,530,554	+				+0.1
1,530,575	-				-0.1
1,530,575	-				-0.4
1,530,614	+				+0.2
1,530,626	+				-0.2
1,530,852	+				+0.4
1,530,897	+				+0.9
1,530,986	+				+2.0
1,530,994	-				-0.6
1,531,003	+				+1.0
1,531,003	+				+0.4
1,531,011	-				-0.7
1,531,049	-				-0.8
1,531,058	-				-1.6
1,531,098	-				-1.3
1,531,123	+				-0.0
1,531,139	+				-0.3
1,531,139	+				-0.3
1,531,139	+				+0.2
1,531,139	+				-0.7
1,531,147	-				+0.4
1,531,147	-				-0.8
1,531,147	-				+0.0
1,531,147	-				-0.4
1,531,324	+		Shew_1318	0.27	-3.0
1,531,633	-		Shew_1318	0.58	-0.6
1,531,661	+		Shew_1318	0.61	-0.4
1,531,669	-		Shew_1318	0.62	-0.9
1,531,775	+		Shew_1318	0.72	-0.3
1,531,775	+		Shew_1318	0.72	-0.3
1,531,780	+		Shew_1318	0.73	-0.4
1,531,780	+		Shew_1318	0.73	-0.6
1,531,783	-		Shew_1318	0.73	-1.3
1,531,783	-		Shew_1318	0.73	-1.8
1,531,788	-		Shew_1318	0.73	-1.0
1,531,788	-		Shew_1318	0.73	-0.5
1,531,870	-		Shew_1318	0.82	-0.7
1,531,946	-		Shew_1318	0.89	-0.8
1,532,109	+				-0.3
1,532,223	-		Shew_1319	0.15	+0.0
1,532,489	+		Shew_1319	0.37	-0.1
1,532,520	+		Shew_1319	0.40	+0.1
1,532,535	+		Shew_1319	0.41	+0.6
1,532,623	+		Shew_1319	0.49	-1.8
1,532,736	-		Shew_1319	0.59	-0.0
1,532,736	-		Shew_1319	0.59	-2.0
1,532,736	-		Shew_1319	0.59	-3.1
1,532,736	-		Shew_1319	0.59	-2.3
1,532,752	-		Shew_1319	0.60	-0.8
1,532,762	-		Shew_1319	0.61	+0.2
1,532,802	+		Shew_1319	0.64	-0.1
1,532,810	-		Shew_1319	0.65	+0.1
1,532,810	-		Shew_1319	0.65	-1.0
1,532,924	+		Shew_1319	0.75	-0.1
1,532,924	+		Shew_1319	0.75	+0.5
1,532,924	+		Shew_1319	0.75	-3.0
1,532,932	-		Shew_1319	0.75	-0.6
1,532,932	-		Shew_1319	0.75	+1.3