Strain Fitness in Shewanella loihica PV-4 around Shew_0948
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | LB |
|---|---|---|---|---|---|
| remove | |||||
| 1,089,643 | + | +0.8 | |||
| 1,089,643 | + | -2.5 | |||
| 1,089,778 | + | Shew_0948 | 0.30 | -0.2 | |
| 1,089,838 | + | Shew_0948 | 0.39 | +0.1 | |
| 1,090,070 | + | Shew_0948 | 0.76 | +1.1 | |
| 1,090,635 | - | Shew_0949 | 0.26 | -0.7 | |
| 1,090,705 | + | Shew_0949 | 0.37 | -0.1 | |
| 1,090,713 | - | Shew_0949 | 0.38 | -0.2 | |
| 1,090,713 | - | Shew_0949 | 0.38 | +0.2 | |
| 1,090,730 | + | Shew_0949 | 0.41 | +0.3 | |
| 1,090,842 | + | Shew_0949 | 0.57 | +0.6 | |
| 1,090,895 | + | Shew_0949 | 0.65 | -0.9 | |
| 1,091,091 | - | +0.0 |
Or see this region's nucleotide sequence