Strain Fitness in Shewanella loihica PV-4 around Shew_0930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,063,512	-		Shew_0929	0.81	+0.4
1,063,514	+		Shew_0929	0.81	-1.5
1,063,514	+		Shew_0929	0.81	+0.1
1,063,514	+		Shew_0929	0.81	-0.1
1,063,514	+		Shew_0929	0.81	+0.8
1,063,514	+		Shew_0929	0.81	+0.0
1,063,514	+		Shew_0929	0.81	+0.5
1,063,514	+		Shew_0929	0.81	+0.8
1,063,514	+		Shew_0929	0.81	-1.8
1,063,514	+		Shew_0929	0.81	-0.9
1,063,514	+		Shew_0929	0.81	+0.9
1,063,514	+		Shew_0929	0.81	-0.6
1,063,514	+		Shew_0929	0.81	+0.8
1,063,514	+		Shew_0929	0.81	+0.1
1,063,514	+		Shew_0929	0.81	-0.1
1,063,522	-		Shew_0929	0.81	+0.6
1,063,522	-		Shew_0929	0.81	-1.2
1,063,522	-		Shew_0929	0.81	+1.1
1,063,522	-		Shew_0929	0.81	+1.4
1,063,522	-		Shew_0929	0.81	-0.0
1,063,522	-		Shew_0929	0.81	-1.6
1,063,522	-		Shew_0929	0.81	-0.5
1,063,522	-		Shew_0929	0.81	+1.1
1,063,522	-		Shew_0929	0.81	+1.8
1,063,522	-		Shew_0929	0.81	-0.4
1,063,522	+		Shew_0929	0.81	-2.0
1,063,522	-		Shew_0929	0.81	+0.8
1,063,522	-		Shew_0929	0.81	-0.3
1,063,530	-		Shew_0929	0.81	-0.6
1,063,531	-		Shew_0929	0.81	-3.4
1,063,541	+		Shew_0929	0.81	+0.3
1,063,547	-		Shew_0929	0.82	-0.0
1,063,549	-		Shew_0929	0.82	+0.1
1,063,549	-		Shew_0929	0.82	+0.3
1,063,549	-		Shew_0929	0.82	+1.6
1,063,549	-		Shew_0929	0.82	-1.5
1,063,549	-		Shew_0929	0.82	-1.0
1,063,576	+		Shew_0929	0.83	-0.0
1,063,638	-		Shew_0929	0.85	+0.3
1,063,652	-		Shew_0929	0.85	-0.0
1,063,830	+				-0.2
1,063,835	+				+0.4
1,063,835	+				+0.5
1,063,835	+				+1.1
1,063,836	-				-0.0
1,063,836	+				+0.0
1,063,836	+				-0.2
1,063,836	+				-1.0
1,063,843	-				+0.4
1,063,845	-				-0.4
1,063,846	+				+0.0
1,063,883	+				+0.5
1,063,895	+				+0.5
1,063,895	+				+0.2
1,063,895	+				-0.5
1,063,895	+				+0.1
1,063,895	+				+0.1
1,063,903	-				+0.1
1,063,903	-				+0.4
1,063,903	-				+0.5
1,063,903	-				+0.1
1,063,903	-				-0.3
1,063,903	-				-0.0
1,063,903	-				-0.0
1,063,903	-				+0.5
1,063,903	-				-0.1
1,063,975	+				-0.2
1,063,984	-				+0.3
1,064,015	-				-0.4
1,064,019	+				+0.3
1,064,019	+				+0.1
1,064,022	+				+0.2
1,064,022	+				+0.2
1,064,025	-				+0.2
1,064,027	-				-0.0
1,064,027	-				-0.9
1,064,032	-				-0.1
1,064,032	-				-0.3
1,064,032	-				-0.2
1,064,044	+				+0.1
1,064,058	+				-0.6
1,064,058	+				+0.3
1,064,058	+				+1.5
1,064,066	-				-0.0
1,064,077	+				-1.0
1,064,089	+				+0.0
1,064,092	-				+0.1
1,064,111	-				-0.1
1,064,141	+				+0.1
1,064,141	+				-0.1
1,064,501	+				-0.6
1,064,646	-		Shew_0930	0.24	-1.2
1,064,706	+		Shew_0930	0.35	-0.6
1,065,056	+				+0.6
1,065,056	+				-0.2
1,065,056	+				+0.5
1,065,064	-				-0.1
1,065,064	-				-0.7
1,065,066	+				+0.7
1,065,526	-		Shew_0931	0.58	-1.2
1,065,539	-		Shew_0931	0.60	-0.2
1,065,539	-		Shew_0931	0.60	+0.0
1,065,740	-		Shew_0931	0.85	+0.2
1,065,826	-				+0.0
1,065,979	+				-0.9