Experiment: arsenate 0.0005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4101 and Pf6N2E2_4102 are separated by 8 nucleotides Pf6N2E2_4102 and Pf6N2E2_4103 are separated by 70 nucleotides Pf6N2E2_4103 and Pf6N2E2_4104 overlap by 35 nucleotides Pf6N2E2_4104 and Pf6N2E2_4105 are separated by 10 nucleotides
Pf6N2E2_4101 - Cytochrome c oxidase polypeptide III (EC 1.9.3.1), at 4,781,930 to 4,782,817
_4101
Pf6N2E2_4102 - hypothetical protein, at 4,782,826 to 4,783,029
_4102
Pf6N2E2_4103 - Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion, at 4,783,100 to 4,783,837
_4103
Pf6N2E2_4104 - Probable transmembrane protein, at 4,783,803 to 4,784,396
_4104
Pf6N2E2_4105 - Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA, at 4,784,407 to 4,785,486
_4105
Position (kb)
4783
4784
4785 Strain fitness (log2 ratio)
-1
0
1
2 at 4782.806 kb on + strand at 4782.806 kb on + strand at 4782.806 kb on + strand at 4782.806 kb on + strand at 4782.807 kb on - strand at 4782.807 kb on - strand at 4782.807 kb on - strand at 4782.807 kb on - strand at 4782.807 kb on - strand at 4783.025 kb on - strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.064 kb on + strand at 4783.065 kb on - strand at 4783.065 kb on - strand at 4783.065 kb on - strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.066 kb on + strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.067 kb on - strand at 4783.071 kb on - strand at 4783.223 kb on + strand, within Pf6N2E2_4103 at 4783.223 kb on + strand, within Pf6N2E2_4103 at 4783.223 kb on + strand, within Pf6N2E2_4103 at 4783.223 kb on + strand, within Pf6N2E2_4103 at 4783.224 kb on - strand, within Pf6N2E2_4103 at 4783.224 kb on - strand, within Pf6N2E2_4103 at 4783.224 kb on - strand, within Pf6N2E2_4103 at 4783.224 kb on - strand, within Pf6N2E2_4103 at 4783.302 kb on + strand, within Pf6N2E2_4103 at 4783.302 kb on + strand, within Pf6N2E2_4103 at 4783.302 kb on + strand, within Pf6N2E2_4103 at 4783.303 kb on - strand, within Pf6N2E2_4103 at 4783.303 kb on - strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.514 kb on + strand, within Pf6N2E2_4103 at 4783.515 kb on - strand, within Pf6N2E2_4103 at 4783.515 kb on - strand, within Pf6N2E2_4103 at 4783.515 kb on - strand, within Pf6N2E2_4103 at 4783.772 kb on + strand at 4783.772 kb on + strand at 4783.932 kb on + strand, within Pf6N2E2_4104 at 4783.932 kb on + strand, within Pf6N2E2_4104 at 4783.932 kb on + strand, within Pf6N2E2_4104 at 4783.932 kb on + strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.933 kb on - strand, within Pf6N2E2_4104 at 4783.968 kb on + strand, within Pf6N2E2_4104 at 4783.969 kb on - strand, within Pf6N2E2_4104 at 4783.969 kb on - strand, within Pf6N2E2_4104 at 4784.018 kb on - strand, within Pf6N2E2_4104 at 4784.094 kb on + strand, within Pf6N2E2_4104 at 4784.094 kb on + strand, within Pf6N2E2_4104 at 4784.185 kb on - strand, within Pf6N2E2_4104 at 4784.248 kb on - strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.284 kb on + strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.285 kb on - strand, within Pf6N2E2_4104 at 4784.479 kb on + strand at 4784.479 kb on + strand at 4784.479 kb on + strand at 4784.530 kb on + strand, within Pf6N2E2_4105 at 4784.530 kb on + strand, within Pf6N2E2_4105 at 4784.642 kb on - strand, within Pf6N2E2_4105 at 4784.642 kb on - strand, within Pf6N2E2_4105 at 4784.672 kb on + strand, within Pf6N2E2_4105 at 4784.989 kb on + strand, within Pf6N2E2_4105 at 4785.094 kb on + strand, within Pf6N2E2_4105 at 4785.094 kb on + strand, within Pf6N2E2_4105 at 4785.094 kb on + strand, within Pf6N2E2_4105 at 4785.094 kb on + strand, within Pf6N2E2_4105 at 4785.095 kb on - strand, within Pf6N2E2_4105 at 4785.176 kb on + strand, within Pf6N2E2_4105 at 4785.364 kb on + strand, within Pf6N2E2_4105 at 4785.364 kb on + strand, within Pf6N2E2_4105 at 4785.364 kb on + strand, within Pf6N2E2_4105 at 4785.364 kb on + strand, within Pf6N2E2_4105 at 4785.365 kb on - strand, within Pf6N2E2_4105 at 4785.365 kb on - strand, within Pf6N2E2_4105 at 4785.365 kb on - strand, within Pf6N2E2_4105
Per-strain Table
Position Strand Gene LocusTag Fraction arsenate 0.0005 M remove 4,782,806 + +0.5 4,782,806 + +0.6 4,782,806 + +0.3 4,782,806 + -0.3 4,782,807 - +0.0 4,782,807 - +0.7 4,782,807 - -0.4 4,782,807 - -0.1 4,782,807 - +0.6 4,783,025 - -0.1 4,783,064 + -1.0 4,783,064 + -0.7 4,783,064 + -0.5 4,783,064 + -0.2 4,783,064 + -0.1 4,783,064 + +0.2 4,783,064 + -0.3 4,783,065 - -0.0 4,783,065 - -1.2 4,783,065 - +0.3 4,783,066 + +0.0 4,783,066 + +0.8 4,783,066 + +1.7 4,783,066 + +0.9 4,783,066 + +0.5 4,783,066 + -0.1 4,783,066 + -0.8 4,783,066 + -0.2 4,783,066 + +0.5 4,783,066 + -1.4 4,783,066 + -0.9 4,783,066 + +0.2 4,783,066 + +0.8 4,783,066 + +0.4 4,783,066 + -0.3 4,783,066 + -0.2 4,783,066 + -0.0 4,783,066 + +0.6 4,783,066 + -0.3 4,783,066 + +0.9 4,783,066 + +0.2 4,783,066 + -0.0 4,783,066 + +0.5 4,783,066 + -1.7 4,783,066 + -0.6 4,783,066 + -0.2 4,783,066 + -0.8 4,783,066 + -0.1 4,783,066 + -1.5 4,783,066 + -0.1 4,783,066 + -0.8 4,783,066 + +0.5 4,783,066 + +0.3 4,783,067 - +0.9 4,783,067 - +0.0 4,783,067 - +0.3 4,783,067 - +0.5 4,783,067 - +1.2 4,783,067 - -1.0 4,783,067 - -0.4 4,783,067 - -1.2 4,783,067 - -0.3 4,783,067 - -0.2 4,783,067 - -0.1 4,783,067 - -0.0 4,783,067 - -0.0 4,783,067 - -0.1 4,783,067 - -0.9 4,783,067 - +0.1 4,783,067 - -1.2 4,783,067 - +0.2 4,783,067 - -0.0 4,783,067 - -0.3 4,783,067 - -0.1 4,783,067 - +0.4 4,783,067 - +0.0 4,783,067 - +1.8 4,783,067 - +0.4 4,783,067 - -1.6 4,783,071 - +0.2 4,783,223 + Pf6N2E2_4103 0.17 -0.8 4,783,223 + Pf6N2E2_4103 0.17 -0.6 4,783,223 + Pf6N2E2_4103 0.17 +0.3 4,783,223 + Pf6N2E2_4103 0.17 +0.6 4,783,224 - Pf6N2E2_4103 0.17 +0.6 4,783,224 - Pf6N2E2_4103 0.17 +1.3 4,783,224 - Pf6N2E2_4103 0.17 +0.2 4,783,224 - Pf6N2E2_4103 0.17 -0.3 4,783,302 + Pf6N2E2_4103 0.27 +0.9 4,783,302 + Pf6N2E2_4103 0.27 +0.6 4,783,302 + Pf6N2E2_4103 0.27 -0.5 4,783,303 - Pf6N2E2_4103 0.28 +0.3 4,783,303 - Pf6N2E2_4103 0.28 -0.3 4,783,514 + Pf6N2E2_4103 0.56 -0.5 4,783,514 + Pf6N2E2_4103 0.56 +0.7 4,783,514 + Pf6N2E2_4103 0.56 -0.1 4,783,514 + Pf6N2E2_4103 0.56 -0.5 4,783,514 + Pf6N2E2_4103 0.56 +0.1 4,783,514 + Pf6N2E2_4103 0.56 -0.1 4,783,514 + Pf6N2E2_4103 0.56 -0.4 4,783,515 - Pf6N2E2_4103 0.56 -0.1 4,783,515 - Pf6N2E2_4103 0.56 +0.2 4,783,515 - Pf6N2E2_4103 0.56 +0.5 4,783,772 + +0.7 4,783,772 + +0.2 4,783,932 + Pf6N2E2_4104 0.22 -0.0 4,783,932 + Pf6N2E2_4104 0.22 +1.5 4,783,932 + Pf6N2E2_4104 0.22 +1.3 4,783,932 + Pf6N2E2_4104 0.22 -1.4 4,783,933 - Pf6N2E2_4104 0.22 -0.3 4,783,933 - Pf6N2E2_4104 0.22 -0.6 4,783,933 - Pf6N2E2_4104 0.22 -1.2 4,783,933 - Pf6N2E2_4104 0.22 -0.7 4,783,933 - Pf6N2E2_4104 0.22 +0.1 4,783,933 - Pf6N2E2_4104 0.22 +0.2 4,783,933 - Pf6N2E2_4104 0.22 +0.8 4,783,933 - Pf6N2E2_4104 0.22 -0.0 4,783,933 - Pf6N2E2_4104 0.22 +0.6 4,783,933 - Pf6N2E2_4104 0.22 +0.8 4,783,968 + Pf6N2E2_4104 0.28 -1.4 4,783,969 - Pf6N2E2_4104 0.28 +0.9 4,783,969 - Pf6N2E2_4104 0.28 +0.3 4,784,018 - Pf6N2E2_4104 0.36 -0.5 4,784,094 + Pf6N2E2_4104 0.49 -1.3 4,784,094 + Pf6N2E2_4104 0.49 -0.4 4,784,185 - Pf6N2E2_4104 0.64 -0.6 4,784,248 - Pf6N2E2_4104 0.75 -0.1 4,784,284 + Pf6N2E2_4104 0.81 -0.0 4,784,284 + Pf6N2E2_4104 0.81 -0.6 4,784,284 + Pf6N2E2_4104 0.81 -0.3 4,784,284 + Pf6N2E2_4104 0.81 +0.5 4,784,284 + Pf6N2E2_4104 0.81 +0.4 4,784,284 + Pf6N2E2_4104 0.81 +0.4 4,784,284 + Pf6N2E2_4104 0.81 +0.3 4,784,285 - Pf6N2E2_4104 0.81 -0.5 4,784,285 - Pf6N2E2_4104 0.81 -0.4 4,784,285 - Pf6N2E2_4104 0.81 -1.2 4,784,285 - Pf6N2E2_4104 0.81 +0.3 4,784,285 - Pf6N2E2_4104 0.81 +0.5 4,784,285 - Pf6N2E2_4104 0.81 -1.5 4,784,285 - Pf6N2E2_4104 0.81 +0.6 4,784,479 + -0.2 4,784,479 + -0.2 4,784,479 + +0.4 4,784,530 + Pf6N2E2_4105 0.11 -0.3 4,784,530 + Pf6N2E2_4105 0.11 -1.2 4,784,642 - Pf6N2E2_4105 0.22 +1.0 4,784,642 - Pf6N2E2_4105 0.22 -0.3 4,784,672 + Pf6N2E2_4105 0.25 +0.6 4,784,989 + Pf6N2E2_4105 0.54 +0.4 4,785,094 + Pf6N2E2_4105 0.64 -0.2 4,785,094 + Pf6N2E2_4105 0.64 +0.9 4,785,094 + Pf6N2E2_4105 0.64 +0.4 4,785,094 + Pf6N2E2_4105 0.64 +0.3 4,785,095 - Pf6N2E2_4105 0.64 -0.6 4,785,176 + Pf6N2E2_4105 0.71 +1.2 4,785,364 + Pf6N2E2_4105 0.89 +1.2 4,785,364 + Pf6N2E2_4105 0.89 +0.9 4,785,364 + Pf6N2E2_4105 0.89 -0.1 4,785,364 + Pf6N2E2_4105 0.89 +0.1 4,785,365 - Pf6N2E2_4105 0.89 +0.3 4,785,365 - Pf6N2E2_4105 0.89 -0.3 4,785,365 - Pf6N2E2_4105 0.89 +0.6
Or see this region's nucleotide sequence