Experiment: arsenate 0.0005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1752 and Pf6N2E2_1753 are separated by 283 nucleotides
Pf6N2E2_1752 - Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.99.8), at 2,067,349 to 2,069,529
_1752
Pf6N2E2_1753 - FIG00643128: hypothetical protein, at 2,069,813 to 2,071,282
_1753
Position (kb)
2069
2070
2071
2072 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2068.813 kb on - strand, within Pf6N2E2_1752 at 2068.815 kb on - strand, within Pf6N2E2_1752 at 2068.815 kb on - strand, within Pf6N2E2_1752 at 2068.863 kb on - strand, within Pf6N2E2_1752 at 2068.943 kb on + strand, within Pf6N2E2_1752 at 2068.943 kb on + strand, within Pf6N2E2_1752 at 2068.944 kb on - strand, within Pf6N2E2_1752 at 2069.039 kb on + strand, within Pf6N2E2_1752 at 2069.143 kb on - strand, within Pf6N2E2_1752 at 2069.192 kb on + strand, within Pf6N2E2_1752 at 2069.193 kb on - strand, within Pf6N2E2_1752 at 2069.253 kb on - strand, within Pf6N2E2_1752 at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.327 kb on + strand at 2069.328 kb on - strand at 2069.328 kb on - strand at 2069.487 kb on + strand at 2069.547 kb on + strand at 2069.614 kb on - strand at 2069.614 kb on - strand at 2069.690 kb on - strand at 2069.703 kb on - strand at 2069.826 kb on + strand at 2069.853 kb on + strand at 2069.854 kb on - strand at 2070.060 kb on - strand, within Pf6N2E2_1753 at 2070.334 kb on - strand, within Pf6N2E2_1753 at 2070.487 kb on - strand, within Pf6N2E2_1753 at 2070.693 kb on - strand, within Pf6N2E2_1753 at 2070.925 kb on + strand, within Pf6N2E2_1753 at 2071.102 kb on - strand, within Pf6N2E2_1753 at 2071.104 kb on + strand, within Pf6N2E2_1753 at 2071.160 kb on - strand at 2071.189 kb on - strand at 2071.235 kb on - strand at 2071.294 kb on - strand at 2071.649 kb on - strand at 2071.703 kb on - strand at 2071.940 kb on - strand at 2071.989 kb on - strand at 2072.182 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction arsenate 0.0005 M remove 2,068,813 - Pf6N2E2_1752 0.67 +0.3 2,068,815 - Pf6N2E2_1752 0.67 +0.4 2,068,815 - Pf6N2E2_1752 0.67 +0.3 2,068,863 - Pf6N2E2_1752 0.69 +0.1 2,068,943 + Pf6N2E2_1752 0.73 -1.5 2,068,943 + Pf6N2E2_1752 0.73 -1.0 2,068,944 - Pf6N2E2_1752 0.73 +0.5 2,069,039 + Pf6N2E2_1752 0.77 +0.2 2,069,143 - Pf6N2E2_1752 0.82 +0.0 2,069,192 + Pf6N2E2_1752 0.85 +0.5 2,069,193 - Pf6N2E2_1752 0.85 -0.3 2,069,253 - Pf6N2E2_1752 0.87 +0.3 2,069,327 + -0.6 2,069,327 + -0.9 2,069,327 + +1.1 2,069,327 + -0.9 2,069,327 + +0.4 2,069,327 + -0.1 2,069,327 + -0.6 2,069,328 - +0.8 2,069,328 - -0.7 2,069,487 + +0.9 2,069,547 + +0.0 2,069,614 - +0.2 2,069,614 - -0.5 2,069,690 - +1.5 2,069,703 - +0.8 2,069,826 + +0.1 2,069,853 + +0.6 2,069,854 - -0.7 2,070,060 - Pf6N2E2_1753 0.17 +3.5 2,070,334 - Pf6N2E2_1753 0.35 -0.9 2,070,487 - Pf6N2E2_1753 0.46 +0.6 2,070,693 - Pf6N2E2_1753 0.60 +0.2 2,070,925 + Pf6N2E2_1753 0.76 +0.9 2,071,102 - Pf6N2E2_1753 0.88 +0.1 2,071,104 + Pf6N2E2_1753 0.88 -1.4 2,071,160 - -0.4 2,071,189 - +0.7 2,071,235 - -0.1 2,071,294 - -1.0 2,071,649 - -1.3 2,071,703 - -0.1 2,071,940 - +1.1 2,071,989 - +0.6 2,072,182 + -0.2
Or see this region's nucleotide sequence