Strain Fitness in Shewanella loihica PV-4 around Shew_2713

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
3,209,611	-		Shew_2712	0.13	-0.4
3,209,836	-		Shew_2712	0.38	-0.6
3,209,974	+		Shew_2712	0.52	+0.0
3,210,024	-		Shew_2712	0.58	-0.7
3,210,108	+		Shew_2712	0.67	+0.8
3,210,215	+		Shew_2712	0.78	-0.3
3,210,584	+				-0.4
3,210,584	+				+0.1
3,210,592	-				-0.3
3,210,611	-				+0.7
3,210,628	-				+0.4
3,210,668	+				+0.2
3,210,840	+		Shew_2713	0.21	+2.3
3,210,848	-		Shew_2713	0.22	-0.0
3,210,848	-		Shew_2713	0.22	-0.3
3,210,926	+		Shew_2713	0.29	+0.5
3,211,089	+		Shew_2713	0.44	-0.2
3,211,314	+		Shew_2713	0.64	-0.1
3,211,316	+		Shew_2713	0.64	-0.0
3,211,316	+		Shew_2713	0.64	+0.0
3,211,324	-		Shew_2713	0.65	-0.9
3,211,324	-		Shew_2713	0.65	-0.3
3,211,324	-		Shew_2713	0.65	+0.6
3,211,324	-		Shew_2713	0.65	-0.7
3,211,411	-		Shew_2713	0.73	+0.2
3,211,432	+		Shew_2713	0.75	-0.4
3,211,680	-				-0.2
3,211,687	-				-0.0
3,211,762	+				-0.0
3,211,774	+				+0.7
3,211,943	+				-0.9
3,212,041	+				-0.2
3,212,041	+				-0.3
3,212,049	-				-0.3
3,212,169	+		Shew_2714	0.20	-0.4
3,212,169	+		Shew_2714	0.20	-1.7
3,212,171	-		Shew_2714	0.20	+0.1
3,212,314	+		Shew_2714	0.39	+0.3
3,212,316	+		Shew_2714	0.39	-1.9
3,212,553	-		Shew_2714	0.71	-0.8
3,212,553	-		Shew_2714	0.71	+0.3