Strain Fitness in Shewanella loihica PV-4 around Shew_2381

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,786,257	+		Shew_2380	0.45	+0.3
2,786,349	+		Shew_2380	0.57	-0.2
2,786,410	+		Shew_2380	0.65	+0.8
2,786,585	+		Shew_2380	0.87	-0.0
2,786,710	-				-1.4
2,786,750	+				+0.5
2,787,111	-		Shew_2381	0.30	+1.3
2,787,277	+		Shew_2381	0.44	-0.4
2,787,421	-		Shew_2381	0.55	-0.2
2,787,482	+		Shew_2381	0.60	-0.0
2,787,482	+		Shew_2381	0.60	-0.1
2,787,482	+		Shew_2381	0.60	-0.6
2,787,490	-		Shew_2381	0.61	-0.4
2,787,490	-		Shew_2381	0.61	+0.3
2,787,517	-		Shew_2381	0.63	+0.2
2,787,517	-		Shew_2381	0.63	+0.1
2,787,814	+		Shew_2381	0.87	+0.0
2,787,814	+		Shew_2381	0.87	-1.6
2,787,814	+		Shew_2381	0.87	-0.3
2,787,822	-		Shew_2381	0.87	-0.1
2,788,466	+		Shew_2382	0.23	-4.3
2,788,530	+		Shew_2382	0.30	-4.6
2,788,557	-		Shew_2382	0.33	-4.6
2,788,630	+		Shew_2382	0.40	-3.6
2,788,884	-		Shew_2382	0.66	-6.4