Strain Fitness in Shewanella loihica PV-4 around Shew_1696

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,948,787	+		Shew_1695	0.11	+0.4
1,948,795	-		Shew_1695	0.13	-0.1
1,948,795	-		Shew_1695	0.13	-0.8
1,948,795	-		Shew_1695	0.13	+0.3
1,948,795	-		Shew_1695	0.13	+1.0
1,949,031	-		Shew_1695	0.81	+1.1
1,949,093	+				-0.1
1,949,101	+				+0.0
1,949,101	-				+0.3
1,949,101	-				+1.1
1,949,101	+				+0.3
1,949,163	+				+0.8
1,949,166	-				+0.4
1,949,217	+				+1.8
1,949,217	+				-2.0
1,949,230	-				-0.7
1,949,231	-				+0.4
1,949,316	+				+0.1
1,949,324	-				-1.6
1,949,382	-				-3.3
1,949,518	+				-0.1
1,949,583	+				-0.6
1,949,789	+				+0.7
1,949,888	+		Shew_1696	0.16	+0.4
1,949,901	-		Shew_1696	0.17	-0.2
1,950,274	+		Shew_1696	0.59	+0.7
1,950,322	+		Shew_1696	0.64	+0.3
1,950,394	+		Shew_1696	0.72	+0.2
1,950,721	-				-1.4
1,950,801	+		Shew_1697	0.21	+0.5
1,950,920	-		Shew_1697	0.45	-0.5
1,950,928	-		Shew_1697	0.47	-0.3
1,951,088	+		Shew_1697	0.79	+0.3
1,951,088	+		Shew_1697	0.79	+0.3
1,951,096	-		Shew_1697	0.80	-0.2
1,951,096	-		Shew_1697	0.80	+1.7
1,951,096	-		Shew_1697	0.80	-0.5
1,951,096	-		Shew_1697	0.80	-0.5
1,951,219	-				-0.4