Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1498 and Ga0059261_1499 overlap by 8 nucleotides Ga0059261_1499 and Ga0059261_1500 overlap by 8 nucleotides Ga0059261_1500 and Ga0059261_1501 are separated by 29 nucleotides
Ga0059261_1498: Ga0059261_1498 - Sulfite reductase, beta subunit (hemoprotein), at 1,582,167 to 1,583,798
_1498
Ga0059261_1499: Ga0059261_1499 - required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) , at 1,583,791 to 1,584,219
_1499
Ga0059261_1500: Ga0059261_1500 - phosphoadenylylsulfate reductase (thioredoxin) (EC 1.8.4.8), at 1,584,212 to 1,584,979
_1500
Ga0059261_1501: Ga0059261_1501 - hypothetical protein, at 1,585,009 to 1,585,677
_1501
Position (kb)
1583
1584
1585 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1582.848 kb on + strand, within Ga0059261_1498 at 1582.848 kb on + strand at 1582.848 kb on + strand, within Ga0059261_1498 at 1582.848 kb on + strand, within Ga0059261_1498 at 1582.849 kb on - strand, within Ga0059261_1498 at 1582.849 kb on - strand, within Ga0059261_1498 at 1582.850 kb on + strand at 1582.850 kb on + strand, within Ga0059261_1498 at 1582.872 kb on + strand, within Ga0059261_1498 at 1582.872 kb on + strand, within Ga0059261_1498 at 1582.898 kb on + strand, within Ga0059261_1498 at 1582.898 kb on + strand, within Ga0059261_1498 at 1582.898 kb on + strand, within Ga0059261_1498 at 1582.898 kb on + strand, within Ga0059261_1498 at 1582.899 kb on - strand, within Ga0059261_1498 at 1582.899 kb on - strand, within Ga0059261_1498 at 1582.899 kb on - strand, within Ga0059261_1498 at 1582.899 kb on - strand, within Ga0059261_1498 at 1582.899 kb on - strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.902 kb on + strand, within Ga0059261_1498 at 1582.903 kb on - strand, within Ga0059261_1498 at 1582.903 kb on - strand, within Ga0059261_1498 at 1582.903 kb on - strand, within Ga0059261_1498 at 1582.903 kb on - strand, within Ga0059261_1498 at 1582.950 kb on + strand, within Ga0059261_1498 at 1582.950 kb on + strand, within Ga0059261_1498 at 1582.951 kb on - strand, within Ga0059261_1498 at 1583.148 kb on + strand, within Ga0059261_1498 at 1583.316 kb on + strand, within Ga0059261_1498 at 1583.406 kb on + strand, within Ga0059261_1498 at 1583.406 kb on + strand, within Ga0059261_1498 at 1583.406 kb on + strand, within Ga0059261_1498 at 1583.579 kb on + strand, within Ga0059261_1498 at 1583.580 kb on - strand, within Ga0059261_1498 at 1583.595 kb on + strand, within Ga0059261_1498 at 1583.595 kb on + strand at 1583.596 kb on - strand, within Ga0059261_1498 at 1583.709 kb on + strand at 1583.748 kb on - strand at 1583.748 kb on - strand at 1583.751 kb on + strand at 1583.752 kb on - strand at 1583.752 kb on - strand at 1583.752 kb on - strand at 1583.752 kb on - strand at 1583.790 kb on + strand at 1583.790 kb on + strand at 1583.790 kb on + strand at 1583.790 kb on + strand at 1583.791 kb on - strand at 1584.023 kb on - strand, within Ga0059261_1499 at 1584.154 kb on + strand, within Ga0059261_1499 at 1584.154 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.166 kb on + strand, within Ga0059261_1499 at 1584.167 kb on - strand, within Ga0059261_1499 at 1584.167 kb on - strand, within Ga0059261_1499 at 1584.587 kb on + strand, within Ga0059261_1500 at 1584.587 kb on + strand, within Ga0059261_1500 at 1584.587 kb on + strand, within Ga0059261_1500 at 1584.587 kb on + strand, within Ga0059261_1500 at 1584.588 kb on - strand, within Ga0059261_1500 at 1584.588 kb on - strand, within Ga0059261_1500 at 1584.588 kb on - strand, within Ga0059261_1500 at 1584.588 kb on - strand, within Ga0059261_1500 at 1584.785 kb on + strand, within Ga0059261_1500 at 1584.786 kb on - strand, within Ga0059261_1500 at 1584.786 kb on - strand at 1584.786 kb on - strand, within Ga0059261_1500 at 1584.833 kb on + strand, within Ga0059261_1500 at 1584.833 kb on + strand, within Ga0059261_1500 at 1584.833 kb on + strand, within Ga0059261_1500 at 1584.833 kb on + strand, within Ga0059261_1500 at 1584.834 kb on - strand, within Ga0059261_1500 at 1585.190 kb on - strand, within Ga0059261_1501
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 1,582,848 + Ga0059261_1498 0.42 -4.4 1,582,848 + -1.3 1,582,848 + Ga0059261_1498 0.42 -2.1 1,582,848 + Ga0059261_1498 0.42 -4.6 1,582,849 - Ga0059261_1498 0.42 -3.2 1,582,849 - Ga0059261_1498 0.42 -2.2 1,582,850 + -2.1 1,582,850 + Ga0059261_1498 0.42 -2.1 1,582,872 + Ga0059261_1498 0.43 -3.1 1,582,872 + Ga0059261_1498 0.43 -5.9 1,582,898 + Ga0059261_1498 0.45 -2.9 1,582,898 + Ga0059261_1498 0.45 -3.8 1,582,898 + Ga0059261_1498 0.45 -4.2 1,582,898 + Ga0059261_1498 0.45 -2.7 1,582,899 - Ga0059261_1498 0.45 -3.5 1,582,899 - Ga0059261_1498 0.45 -3.0 1,582,899 - Ga0059261_1498 0.45 -3.4 1,582,899 - Ga0059261_1498 0.45 -4.9 1,582,899 - Ga0059261_1498 0.45 -2.5 1,582,902 + Ga0059261_1498 0.45 -4.6 1,582,902 + Ga0059261_1498 0.45 -3.7 1,582,902 + Ga0059261_1498 0.45 -3.2 1,582,902 + Ga0059261_1498 0.45 -4.2 1,582,902 + Ga0059261_1498 0.45 -4.6 1,582,902 + Ga0059261_1498 0.45 -2.9 1,582,902 + Ga0059261_1498 0.45 -2.1 1,582,902 + Ga0059261_1498 0.45 -4.0 1,582,902 + Ga0059261_1498 0.45 -3.8 1,582,903 - Ga0059261_1498 0.45 -3.3 1,582,903 - Ga0059261_1498 0.45 -2.4 1,582,903 - Ga0059261_1498 0.45 -1.8 1,582,903 - Ga0059261_1498 0.45 -3.1 1,582,950 + Ga0059261_1498 0.48 -3.6 1,582,950 + Ga0059261_1498 0.48 -4.0 1,582,951 - Ga0059261_1498 0.48 -1.3 1,583,148 + Ga0059261_1498 0.60 -3.3 1,583,316 + Ga0059261_1498 0.70 -3.0 1,583,406 + Ga0059261_1498 0.76 -3.6 1,583,406 + Ga0059261_1498 0.76 -5.2 1,583,406 + Ga0059261_1498 0.76 -3.3 1,583,579 + Ga0059261_1498 0.87 -5.0 1,583,580 - Ga0059261_1498 0.87 -4.9 1,583,595 + Ga0059261_1498 0.88 -4.2 1,583,595 + -1.4 1,583,596 - Ga0059261_1498 0.88 -3.5 1,583,709 + -3.4 1,583,748 - -4.5 1,583,748 - -3.7 1,583,751 + -4.5 1,583,752 - -1.6 1,583,752 - -4.6 1,583,752 - -2.9 1,583,752 - -3.1 1,583,790 + -4.1 1,583,790 + -3.1 1,583,790 + -4.1 1,583,790 + -3.6 1,583,791 - -3.5 1,584,023 - Ga0059261_1499 0.54 -3.9 1,584,154 + Ga0059261_1499 0.85 -4.6 1,584,154 + Ga0059261_1499 0.85 -2.6 1,584,166 + Ga0059261_1499 0.87 -4.4 1,584,166 + Ga0059261_1499 0.87 -2.8 1,584,166 + Ga0059261_1499 0.87 -5.3 1,584,166 + Ga0059261_1499 0.87 -5.5 1,584,166 + Ga0059261_1499 0.87 -3.4 1,584,166 + Ga0059261_1499 0.87 -2.6 1,584,167 - Ga0059261_1499 0.88 -4.4 1,584,167 - Ga0059261_1499 0.88 -4.6 1,584,587 + Ga0059261_1500 0.49 -1.9 1,584,587 + Ga0059261_1500 0.49 -3.5 1,584,587 + Ga0059261_1500 0.49 -1.8 1,584,587 + Ga0059261_1500 0.49 -3.9 1,584,588 - Ga0059261_1500 0.49 -2.3 1,584,588 - Ga0059261_1500 0.49 -0.8 1,584,588 - Ga0059261_1500 0.49 -3.9 1,584,588 - Ga0059261_1500 0.49 -3.7 1,584,785 + Ga0059261_1500 0.75 -4.5 1,584,786 - Ga0059261_1500 0.75 -2.0 1,584,786 - -2.1 1,584,786 - Ga0059261_1500 0.75 -4.2 1,584,833 + Ga0059261_1500 0.81 -4.2 1,584,833 + Ga0059261_1500 0.81 -3.7 1,584,833 + Ga0059261_1500 0.81 -4.2 1,584,833 + Ga0059261_1500 0.81 -1.3 1,584,834 - Ga0059261_1500 0.81 -2.1 1,585,190 - Ga0059261_1501 0.27 +0.0
Or see this region's nucleotide sequence