Strain Fitness in Shewanella loihica PV-4 around Shew_3699

Experiment: Tetracycline 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0002 mg/ml
4,402,629	+		Shew_3698	0.34	+0.4
4,402,682	+		Shew_3698	0.41	+0.7
4,402,712	-		Shew_3698	0.44	-0.1
4,402,765	+		Shew_3698	0.50	+1.3
4,402,773	-		Shew_3698	0.51	+0.6
4,402,773	-		Shew_3698	0.51	+0.4
4,402,773	-		Shew_3698	0.51	+1.2
4,403,072	+		Shew_3698	0.86	+0.7
4,403,129	+				+0.2
4,403,427	+				+0.1
4,403,493	+				-0.5
4,403,562	-		Shew_3699	0.16	+0.3
4,403,860	-		Shew_3699	0.53	+1.4
4,403,956	+		Shew_3699	0.65	+0.3
4,404,252	-				+0.7
4,404,307	+				-0.1
4,404,334	-				-0.0
4,404,406	+		Shew_3700	0.16	+0.3
4,404,429	+		Shew_3700	0.18	-0.3
4,404,623	+		Shew_3700	0.36	+1.1
4,404,965	+		Shew_3700	0.67	+0.2
4,404,965	+		Shew_3700	0.67	+0.0
4,404,986	-		Shew_3700	0.69	+1.1
4,404,986	-		Shew_3700	0.69	+0.5
4,405,074	-		Shew_3700	0.77	+0.1
4,405,087	+		Shew_3700	0.78	+0.5
4,405,095	-		Shew_3700	0.79	-0.1
4,405,190	+		Shew_3700	0.87	-0.0
4,405,198	-		Shew_3700	0.88	+0.0
4,405,198	-		Shew_3700	0.88	-1.2