Experiment: Tetracycline 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0282 and Shew_0283 are separated by 115 nucleotides Shew_0283 and Shew_0284 are separated by 329 nucleotides
Shew_0282: Shew_0282 - phospholipid/glycerol acyltransferase (RefSeq), at 299,316 to 300,200
_0282
Shew_0283: Shew_0283 - Mg chelatase, subunit ChlI (RefSeq), at 300,316 to 301,836
_0283
Shew_0284: Shew_0284 - hypothetical protein (RefSeq), at 302,166 to 303,491
_0284
Position (kb) 300
301
302 Strain fitness (log2 ratio) -1
0
1 at 299.604 kb on - strand, within Shew_0282 at 299.796 kb on + strand, within Shew_0282 at 299.825 kb on - strand, within Shew_0282 at 300.258 kb on + strand at 300.289 kb on - strand at 300.323 kb on + strand at 300.416 kb on - strand at 300.527 kb on - strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.552 kb on + strand, within Shew_0283 at 300.963 kb on - strand, within Shew_0283 at 301.014 kb on + strand, within Shew_0283 at 301.022 kb on - strand, within Shew_0283 at 301.279 kb on - strand, within Shew_0283 at 301.347 kb on - strand, within Shew_0283 at 301.484 kb on + strand, within Shew_0283 at 301.683 kb on - strand, within Shew_0283 at 301.718 kb on + strand at 301.737 kb on + strand at 302.071 kb on + strand at 302.139 kb on - strand at 302.139 kb on - strand at 302.468 kb on + strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.481 kb on - strand, within Shew_0284 at 302.621 kb on + strand, within Shew_0284 at 302.650 kb on - strand, within Shew_0284 at 302.698 kb on + strand, within Shew_0284
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0002 mg/ml remove 299,604 - Shew_0282 0.33 -0.5 299,796 + Shew_0282 0.54 +0.2 299,825 - Shew_0282 0.58 +0.7 300,258 + -0.1 300,289 - +1.4 300,323 + -0.1 300,416 - +0.7 300,527 - Shew_0283 0.14 +0.8 300,552 + Shew_0283 0.16 -0.1 300,552 + Shew_0283 0.16 +0.5 300,963 - Shew_0283 0.43 +0.5 301,014 + Shew_0283 0.46 +0.2 301,022 - Shew_0283 0.46 +0.1 301,279 - Shew_0283 0.63 -0.1 301,347 - Shew_0283 0.68 +1.2 301,484 + Shew_0283 0.77 -0.2 301,683 - Shew_0283 0.90 +0.1 301,718 + +1.5 301,737 + +0.1 302,071 + +1.4 302,139 - -0.3 302,139 - +0.1 302,468 + Shew_0284 0.23 -0.3 302,481 - Shew_0284 0.24 -0.4 302,481 - Shew_0284 0.24 +1.0 302,621 + Shew_0284 0.34 -0.1 302,650 - Shew_0284 0.37 -1.4 302,698 + Shew_0284 0.40 -0.6
Or see this region's nucleotide sequence