Experiment: LB no stress 48 hours
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_718 and Pf6N2E2_719 are separated by 88 nucleotides Pf6N2E2_719 and Pf6N2E2_720 overlap by 4 nucleotides Pf6N2E2_720 and Pf6N2E2_721 are separated by 81 nucleotides
Pf6N2E2_718 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 822,406 to 823,053
_718
Pf6N2E2_719 - Molybdenum cofactor biosynthesis protein MoaB, at 823,142 to 823,696
_719
Pf6N2E2_720 - Molybdopterin biosynthesis protein MoeA, at 823,693 to 824,928
_720
Pf6N2E2_721 - FIG139552: Putative protease, at 825,010 to 826,005
_721
Position (kb) 823
824
825 Strain fitness (log2 ratio) -2
-1
0
1 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.732 kb on - strand, within Pf6N2E2_718 at 822.782 kb on - strand, within Pf6N2E2_718 at 823.067 kb on + strand at 823.067 kb on + strand at 823.067 kb on + strand at 823.068 kb on - strand at 823.068 kb on - strand at 823.084 kb on - strand at 823.193 kb on - strand at 823.303 kb on + strand, within Pf6N2E2_719 at 823.308 kb on - strand, within Pf6N2E2_719 at 823.886 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.228 kb on - strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.308 kb on + strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.309 kb on - strand, within Pf6N2E2_720 at 824.325 kb on + strand, within Pf6N2E2_720 at 824.688 kb on - strand, within Pf6N2E2_720 at 824.743 kb on + strand, within Pf6N2E2_720 at 824.743 kb on + strand, within Pf6N2E2_720 at 824.747 kb on + strand, within Pf6N2E2_720 at 824.747 kb on + strand, within Pf6N2E2_720 at 824.899 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.082 kb on + strand at 825.083 kb on - strand at 825.083 kb on - strand at 825.193 kb on + strand, within Pf6N2E2_721 at 825.193 kb on + strand, within Pf6N2E2_721 at 825.193 kb on + strand, within Pf6N2E2_721 at 825.207 kb on + strand, within Pf6N2E2_721 at 825.208 kb on - strand, within Pf6N2E2_721 at 825.208 kb on - strand, within Pf6N2E2_721 at 825.357 kb on - strand, within Pf6N2E2_721 at 825.550 kb on + strand, within Pf6N2E2_721 at 825.550 kb on + strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.551 kb on - strand, within Pf6N2E2_721 at 825.668 kb on - strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.847 kb on + strand, within Pf6N2E2_721 at 825.848 kb on - strand, within Pf6N2E2_721 at 825.848 kb on - strand, within Pf6N2E2_721
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress 48 hours remove 822,732 - Pf6N2E2_718 0.50 -2.4 822,732 - Pf6N2E2_718 0.50 +0.4 822,732 - Pf6N2E2_718 0.50 -1.2 822,782 - Pf6N2E2_718 0.58 +0.0 823,067 + -0.6 823,067 + -0.8 823,067 + -0.4 823,068 - +1.4 823,068 - -0.1 823,084 - -2.3 823,193 - +0.2 823,303 + Pf6N2E2_719 0.29 +1.5 823,308 - Pf6N2E2_719 0.30 -0.6 823,886 - Pf6N2E2_720 0.16 -0.2 824,228 - Pf6N2E2_720 0.43 -1.4 824,228 - Pf6N2E2_720 0.43 +0.4 824,308 + Pf6N2E2_720 0.50 -0.3 824,308 + Pf6N2E2_720 0.50 +0.3 824,309 - Pf6N2E2_720 0.50 -0.1 824,309 - Pf6N2E2_720 0.50 -2.4 824,325 + Pf6N2E2_720 0.51 -0.4 824,688 - Pf6N2E2_720 0.81 -1.4 824,743 + Pf6N2E2_720 0.85 -0.9 824,743 + Pf6N2E2_720 0.85 -0.6 824,747 + Pf6N2E2_720 0.85 +0.5 824,747 + Pf6N2E2_720 0.85 -0.8 824,899 + -1.0 825,082 + -0.1 825,082 + +1.1 825,082 + -0.6 825,082 + -2.7 825,082 + -0.4 825,082 + +1.1 825,082 + +0.4 825,083 - -0.4 825,083 - -0.5 825,193 + Pf6N2E2_721 0.18 +1.4 825,193 + Pf6N2E2_721 0.18 +0.9 825,193 + Pf6N2E2_721 0.18 -0.6 825,207 + Pf6N2E2_721 0.20 -0.3 825,208 - Pf6N2E2_721 0.20 -0.7 825,208 - Pf6N2E2_721 0.20 -1.8 825,357 - Pf6N2E2_721 0.35 +1.0 825,550 + Pf6N2E2_721 0.54 -2.2 825,550 + Pf6N2E2_721 0.54 -0.6 825,551 - Pf6N2E2_721 0.54 -0.1 825,551 - Pf6N2E2_721 0.54 -0.8 825,551 - Pf6N2E2_721 0.54 -0.0 825,551 - Pf6N2E2_721 0.54 +1.2 825,668 - Pf6N2E2_721 0.66 -0.2 825,847 + Pf6N2E2_721 0.84 -0.5 825,847 + Pf6N2E2_721 0.84 -0.6 825,847 + Pf6N2E2_721 0.84 +0.8 825,848 - Pf6N2E2_721 0.84 -0.1 825,848 - Pf6N2E2_721 0.84 +1.4
Or see this region's nucleotide sequence