Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27370 and BWI76_RS27375 overlap by 23 nucleotides BWI76_RS27375 and BWI76_RS27380 are separated by 174 nucleotides BWI76_RS27380 and BWI76_RS27385 are separated by 124 nucleotides BWI76_RS27385 and BWI76_RS27390 are separated by 65 nucleotides
BWI76_RS27370: BWI76_RS27370 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase, at 5,679,856 to 5,681,067
_RS27370
BWI76_RS27375: BWI76_RS27375 - deoxyuridine 5'-triphosphate nucleotidohydrolase, at 5,681,045 to 5,681,503
_RS27375
BWI76_RS27380: BWI76_RS27380 - nucleoid occlusion factor SlmA, at 5,681,678 to 5,682,274
_RS27380
BWI76_RS27385: BWI76_RS27385 - orotate phosphoribosyltransferase, at 5,682,399 to 5,683,040
_RS27385
BWI76_RS27390: BWI76_RS27390 - ribonuclease PH, at 5,683,106 to 5,683,822
_RS27390
Position (kb) 5681
5682
5683 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 5681.619 kb on - strand at 5681.767 kb on + strand, within BWI76_RS27380 at 5681.770 kb on + strand, within BWI76_RS27380 at 5682.119 kb on + strand, within BWI76_RS27380 at 5682.161 kb on + strand, within BWI76_RS27380 at 5682.193 kb on - strand, within BWI76_RS27380 at 5682.350 kb on + strand at 5682.357 kb on + strand at 5682.423 kb on + strand at 5682.695 kb on - strand, within BWI76_RS27385 at 5682.695 kb on - strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.916 kb on + strand, within BWI76_RS27385 at 5682.924 kb on - strand, within BWI76_RS27385 at 5682.924 kb on - strand, within BWI76_RS27385 at 5682.924 kb on - strand, within BWI76_RS27385 at 5683.011 kb on + strand at 5683.056 kb on - strand at 5683.142 kb on + strand at 5683.155 kb on + strand at 5683.194 kb on - strand, within BWI76_RS27390
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 5,681,619 - -0.8 5,681,767 + BWI76_RS27380 0.15 -0.4 5,681,770 + BWI76_RS27380 0.15 +0.3 5,682,119 + BWI76_RS27380 0.74 -0.8 5,682,161 + BWI76_RS27380 0.81 -0.4 5,682,193 - BWI76_RS27380 0.86 -1.5 5,682,350 + +0.3 5,682,357 + +0.0 5,682,423 + -4.6 5,682,695 - BWI76_RS27385 0.46 -2.6 5,682,695 - BWI76_RS27385 0.46 -6.0 5,682,916 + BWI76_RS27385 0.81 -0.1 5,682,916 + BWI76_RS27385 0.81 -3.0 5,682,916 + BWI76_RS27385 0.81 -4.1 5,682,916 + BWI76_RS27385 0.81 -3.2 5,682,916 + BWI76_RS27385 0.81 -2.9 5,682,916 + BWI76_RS27385 0.81 -4.5 5,682,916 + BWI76_RS27385 0.81 -3.9 5,682,924 - BWI76_RS27385 0.82 -4.0 5,682,924 - BWI76_RS27385 0.82 -2.3 5,682,924 - BWI76_RS27385 0.82 -1.4 5,683,011 + -4.6 5,683,056 - +0.1 5,683,142 + -3.1 5,683,155 + -3.5 5,683,194 - BWI76_RS27390 0.12 -0.2
Or see this region's nucleotide sequence