Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS26870

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS26865 and BWI76_RS26870 overlap by 4 nucleotidesBWI76_RS26870 and BWI76_RS26875 are separated by 10 nucleotidesBWI76_RS26875 and BWI76_RS26880 are separated by 9 nucleotides BWI76_RS26865: BWI76_RS26865 - dipeptide ABC transporter ATP-binding protein, at 5,573,511 to 5,574,524 _RS26865 BWI76_RS26870: BWI76_RS26870 - dipeptide ABC transporter ATP-binding protein, at 5,574,521 to 5,575,504 _RS26870 BWI76_RS26875: BWI76_RS26875 - dipeptide ABC transporter permease DppC, at 5,575,515 to 5,576,417 _RS26875 BWI76_RS26880: BWI76_RS26880 - dipeptide ABC transporter permease DppB, at 5,576,427 to 5,577,446 _RS26880 Position (kb) 5574 5575 5576Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 5573.522 kb on - strandat 5573.522 kb on - strandat 5573.522 kb on - strandat 5573.575 kb on + strandat 5573.605 kb on - strandat 5573.611 kb on - strandat 5573.729 kb on + strand, within BWI76_RS26865at 5573.734 kb on + strand, within BWI76_RS26865at 5573.734 kb on + strand, within BWI76_RS26865at 5573.752 kb on - strand, within BWI76_RS26865at 5573.778 kb on + strand, within BWI76_RS26865at 5573.806 kb on - strand, within BWI76_RS26865at 5573.888 kb on + strand, within BWI76_RS26865at 5573.941 kb on + strand, within BWI76_RS26865at 5573.993 kb on + strand, within BWI76_RS26865at 5574.085 kb on - strand, within BWI76_RS26865at 5574.119 kb on + strand, within BWI76_RS26865at 5574.122 kb on - strand, within BWI76_RS26865at 5574.139 kb on - strand, within BWI76_RS26865at 5574.207 kb on + strand, within BWI76_RS26865at 5574.364 kb on + strand, within BWI76_RS26865at 5574.416 kb on - strand, within BWI76_RS26865at 5574.462 kb on - strandat 5574.491 kb on - strandat 5574.494 kb on + strandat 5574.579 kb on + strandat 5574.603 kb on - strandat 5574.719 kb on - strand, within BWI76_RS26870at 5574.920 kb on - strand, within BWI76_RS26870at 5575.027 kb on + strand, within BWI76_RS26870at 5575.061 kb on - strand, within BWI76_RS26870at 5575.193 kb on - strand, within BWI76_RS26870at 5575.242 kb on + strand, within BWI76_RS26870at 5575.290 kb on - strand, within BWI76_RS26870at 5575.411 kb on + strandat 5575.411 kb on + strandat 5575.526 kb on + strandat 5575.550 kb on + strandat 5575.565 kb on + strandat 5575.667 kb on + strand, within BWI76_RS26875at 5575.766 kb on + strand, within BWI76_RS26875at 5575.868 kb on + strand, within BWI76_RS26875at 5576.093 kb on + strand, within BWI76_RS26875at 5576.093 kb on + strand, within BWI76_RS26875at 5576.310 kb on - strandat 5576.458 kb on - strandat 5576.469 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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5,573,522 - -0.2
5,573,522 - -1.6
5,573,522 - -1.5
5,573,575 + -1.6
5,573,605 - -2.1
5,573,611 - -2.8
5,573,729 + BWI76_RS26865 0.21 -1.3
5,573,734 + BWI76_RS26865 0.22 -1.3
5,573,734 + BWI76_RS26865 0.22 -4.1
5,573,752 - BWI76_RS26865 0.24 -1.6
5,573,778 + BWI76_RS26865 0.26 -1.6
5,573,806 - BWI76_RS26865 0.29 -1.2
5,573,888 + BWI76_RS26865 0.37 -2.3
5,573,941 + BWI76_RS26865 0.42 -1.2
5,573,993 + BWI76_RS26865 0.48 -0.3
5,574,085 - BWI76_RS26865 0.57 -1.9
5,574,119 + BWI76_RS26865 0.60 -0.2
5,574,122 - BWI76_RS26865 0.60 +0.8
5,574,139 - BWI76_RS26865 0.62 -2.1
5,574,207 + BWI76_RS26865 0.69 +0.2
5,574,364 + BWI76_RS26865 0.84 -3.9
5,574,416 - BWI76_RS26865 0.89 -0.9
5,574,462 - -2.8
5,574,491 - +1.2
5,574,494 + -1.3
5,574,579 + -1.3
5,574,603 - -0.3
5,574,719 - BWI76_RS26870 0.20 -0.6
5,574,920 - BWI76_RS26870 0.41 -3.3
5,575,027 + BWI76_RS26870 0.51 -1.0
5,575,061 - BWI76_RS26870 0.55 -1.0
5,575,193 - BWI76_RS26870 0.68 -2.5
5,575,242 + BWI76_RS26870 0.73 +0.1
5,575,290 - BWI76_RS26870 0.78 -1.9
5,575,411 + -1.9
5,575,411 + -1.7
5,575,526 + -2.2
5,575,550 + -1.7
5,575,565 + -1.2
5,575,667 + BWI76_RS26875 0.17 -2.6
5,575,766 + BWI76_RS26875 0.28 -2.7
5,575,868 + BWI76_RS26875 0.39 +1.5
5,576,093 + BWI76_RS26875 0.64 -1.0
5,576,093 + BWI76_RS26875 0.64 -2.7
5,576,310 - +2.2
5,576,458 - -2.2
5,576,469 - -1.9

Or see this region's nucleotide sequence