Experiment: Minimal media pH7
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03480 and AO353_03485 are separated by 57 nucleotides AO353_03485 and AO353_03490 are separated by 182 nucleotides
AO353_03480: AO353_03480 - carbamate kinase, at 744,313 to 745,242
_03480
AO353_03485: AO353_03485 - acetyl-CoA carboxylase, at 745,300 to 745,656
_03485
AO353_03490: AO353_03490 - Fis family transcriptional regulator, at 745,839 to 747,347
_03490
Position (kb) 745
746 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 744.312 kb on + strand at 744.312 kb on + strand at 744.313 kb on - strand at 744.393 kb on + strand at 744.502 kb on + strand, within AO353_03480 at 744.502 kb on + strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.503 kb on - strand, within AO353_03480 at 744.565 kb on + strand at 744.565 kb on + strand, within AO353_03480 at 744.566 kb on - strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.694 kb on + strand, within AO353_03480 at 744.695 kb on - strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.883 kb on + strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 744.884 kb on - strand, within AO353_03480 at 745.227 kb on + strand at 745.234 kb on + strand at 745.234 kb on + strand at 745.234 kb on + strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.235 kb on - strand at 745.241 kb on - strand at 745.241 kb on - strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.307 kb on + strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.308 kb on - strand at 745.366 kb on + strand, within AO353_03485 at 745.366 kb on + strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.367 kb on - strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.413 kb on + strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.414 kb on - strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.415 kb on + strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.416 kb on - strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.534 kb on + strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.535 kb on - strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.576 kb on + strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.577 kb on - strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.579 kb on + strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.580 kb on - strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.601 kb on + strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.602 kb on - strand, within AO353_03485 at 745.654 kb on + strand at 745.654 kb on + strand at 745.654 kb on + strand at 745.654 kb on + strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.655 kb on - strand at 745.657 kb on + strand at 745.657 kb on + strand at 745.658 kb on - strand at 745.658 kb on - strand at 745.709 kb on + strand at 745.709 kb on + strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.710 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.717 kb on - strand at 745.755 kb on + strand at 745.755 kb on + strand at 745.766 kb on + strand at 745.766 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.799 kb on + strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.800 kb on - strand at 745.953 kb on + strand at 745.953 kb on + strand at 745.954 kb on - strand at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.172 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.346 kb on + strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.347 kb on - strand, within AO353_03490 at 746.447 kb on - strand, within AO353_03490
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal media pH7 remove 744,312 + -0.5 744,312 + -0.5 744,313 - -2.2 744,393 + -0.9 744,502 + AO353_03480 0.20 -0.8 744,502 + AO353_03480 0.20 +1.5 744,503 - AO353_03480 0.20 +0.4 744,503 - AO353_03480 0.20 -1.1 744,503 - AO353_03480 0.20 -1.5 744,565 + +0.5 744,565 + AO353_03480 0.27 +0.6 744,566 - AO353_03480 0.27 +2.2 744,694 + AO353_03480 0.41 +0.6 744,694 + AO353_03480 0.41 -1.2 744,694 + AO353_03480 0.41 +0.9 744,695 - AO353_03480 0.41 -1.6 744,883 + AO353_03480 0.61 +0.3 744,883 + AO353_03480 0.61 +0.4 744,883 + AO353_03480 0.61 -0.3 744,883 + AO353_03480 0.61 -1.1 744,883 + AO353_03480 0.61 -0.7 744,883 + AO353_03480 0.61 +0.6 744,884 - AO353_03480 0.61 -0.4 744,884 - AO353_03480 0.61 +0.5 744,884 - AO353_03480 0.61 +0.1 744,884 - AO353_03480 0.61 +0.8 744,884 - AO353_03480 0.61 -0.5 744,884 - AO353_03480 0.61 +0.9 745,227 + +1.2 745,234 + -1.5 745,234 + -1.4 745,234 + -1.3 745,235 - -0.6 745,235 - -0.8 745,235 - +0.4 745,235 - -0.6 745,235 - +0.1 745,241 - -1.0 745,241 - -1.7 745,307 + -1.0 745,307 + +0.0 745,307 + +0.9 745,307 + +1.0 745,307 + +0.1 745,307 + +1.2 745,307 + -0.0 745,307 + -0.7 745,308 - -0.7 745,308 - +1.1 745,308 - +1.5 745,308 - -0.0 745,308 - +0.2 745,308 - -0.9 745,366 + AO353_03485 0.18 -0.7 745,366 + AO353_03485 0.18 +0.2 745,367 - AO353_03485 0.19 -0.4 745,367 - AO353_03485 0.19 -1.9 745,367 - AO353_03485 0.19 +2.0 745,367 - AO353_03485 0.19 -0.7 745,413 + AO353_03485 0.32 +1.3 745,413 + AO353_03485 0.32 -1.1 745,413 + AO353_03485 0.32 +0.9 745,413 + AO353_03485 0.32 -0.0 745,413 + AO353_03485 0.32 +1.1 745,413 + AO353_03485 0.32 +0.7 745,413 + AO353_03485 0.32 -2.3 745,413 + AO353_03485 0.32 +0.7 745,414 - AO353_03485 0.32 -0.7 745,414 - AO353_03485 0.32 +0.7 745,414 - AO353_03485 0.32 +1.9 745,414 - AO353_03485 0.32 -0.3 745,414 - AO353_03485 0.32 -0.2 745,414 - AO353_03485 0.32 +1.1 745,414 - AO353_03485 0.32 -0.3 745,414 - AO353_03485 0.32 +0.5 745,414 - AO353_03485 0.32 +0.5 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 +1.1 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 +1.2 745,415 + AO353_03485 0.32 -0.8 745,415 + AO353_03485 0.32 +1.3 745,415 + AO353_03485 0.32 -0.6 745,415 + AO353_03485 0.32 -0.3 745,415 + AO353_03485 0.32 +1.4 745,415 + AO353_03485 0.32 -0.5 745,415 + AO353_03485 0.32 +1.7 745,415 + AO353_03485 0.32 +0.3 745,415 + AO353_03485 0.32 -0.9 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 -1.1 745,415 + AO353_03485 0.32 +0.7 745,415 + AO353_03485 0.32 -1.1 745,415 + AO353_03485 0.32 +0.6 745,415 + AO353_03485 0.32 -0.4 745,416 - AO353_03485 0.32 -0.1 745,416 - AO353_03485 0.32 +0.4 745,416 - AO353_03485 0.32 -0.7 745,416 - AO353_03485 0.32 -1.0 745,416 - AO353_03485 0.32 +0.4 745,416 - AO353_03485 0.32 +0.3 745,416 - AO353_03485 0.32 +0.0 745,416 - AO353_03485 0.32 +0.5 745,416 - AO353_03485 0.32 +0.5 745,416 - AO353_03485 0.32 +1.1 745,416 - AO353_03485 0.32 +1.3 745,416 - AO353_03485 0.32 +0.9 745,416 - AO353_03485 0.32 +0.2 745,416 - AO353_03485 0.32 +0.4 745,416 - AO353_03485 0.32 +0.8 745,416 - AO353_03485 0.32 +0.1 745,534 + AO353_03485 0.66 +1.2 745,534 + AO353_03485 0.66 -0.6 745,534 + AO353_03485 0.66 +1.1 745,534 + AO353_03485 0.66 -0.3 745,534 + AO353_03485 0.66 +3.3 745,535 - AO353_03485 0.66 -0.4 745,535 - AO353_03485 0.66 +0.5 745,535 - AO353_03485 0.66 -0.0 745,535 - AO353_03485 0.66 -0.7 745,576 + AO353_03485 0.77 -2.3 745,576 + AO353_03485 0.77 -0.8 745,576 + AO353_03485 0.77 -0.6 745,576 + AO353_03485 0.77 +0.6 745,576 + AO353_03485 0.77 -0.3 745,576 + AO353_03485 0.77 -1.1 745,577 - AO353_03485 0.78 +1.4 745,577 - AO353_03485 0.78 -0.1 745,577 - AO353_03485 0.78 +0.1 745,577 - AO353_03485 0.78 -0.5 745,577 - AO353_03485 0.78 +2.1 745,579 + AO353_03485 0.78 -0.8 745,579 + AO353_03485 0.78 -0.9 745,579 + AO353_03485 0.78 +0.7 745,579 + AO353_03485 0.78 +0.8 745,579 + AO353_03485 0.78 -2.1 745,579 + AO353_03485 0.78 +0.6 745,579 + AO353_03485 0.78 +0.3 745,580 - AO353_03485 0.78 +0.8 745,580 - AO353_03485 0.78 +1.1 745,580 - AO353_03485 0.78 -1.3 745,580 - AO353_03485 0.78 -0.4 745,601 + AO353_03485 0.84 -1.7 745,601 + AO353_03485 0.84 -0.7 745,601 + AO353_03485 0.84 +0.9 745,601 + AO353_03485 0.84 +0.8 745,602 - AO353_03485 0.85 +1.1 745,602 - AO353_03485 0.85 +0.9 745,602 - AO353_03485 0.85 -0.4 745,602 - AO353_03485 0.85 +0.3 745,602 - AO353_03485 0.85 -0.1 745,654 + +0.5 745,654 + +1.1 745,654 + -1.2 745,654 + +0.7 745,655 - +1.9 745,655 - -2.0 745,655 - +1.6 745,655 - -0.4 745,655 - +0.6 745,655 - +0.9 745,655 - +0.5 745,655 - -0.7 745,655 - -0.8 745,657 + +2.3 745,657 + -0.1 745,658 - +0.9 745,658 - -2.0 745,709 + -1.1 745,709 + -1.1 745,710 - -0.9 745,710 - -2.6 745,710 - +1.1 745,710 - -0.5 745,717 - -0.1 745,717 - -1.8 745,717 - -1.9 745,717 - +1.4 745,755 + -0.0 745,755 + -0.1 745,766 + -0.4 745,766 + +1.0 745,799 + -0.8 745,799 + -1.4 745,799 + +2.6 745,799 + -0.7 745,799 + -1.9 745,799 + +0.2 745,799 + -0.7 745,800 - +0.6 745,800 - -0.0 745,800 - -0.1 745,800 - -1.4 745,800 - -0.6 745,800 - -0.7 745,800 - -0.6 745,800 - +1.3 745,953 + -0.8 745,953 + -0.2 745,954 - +0.6 746,172 + AO353_03490 0.22 -1.7 746,172 + AO353_03490 0.22 +1.2 746,172 + AO353_03490 0.22 +0.3 746,172 + AO353_03490 0.22 +1.1 746,172 + AO353_03490 0.22 +0.1 746,172 + AO353_03490 0.22 +0.6 746,346 + AO353_03490 0.34 -1.1 746,346 + AO353_03490 0.34 +0.7 746,346 + AO353_03490 0.34 +0.8 746,346 + AO353_03490 0.34 -1.9 746,346 + AO353_03490 0.34 +1.1 746,346 + AO353_03490 0.34 +0.6 746,346 + AO353_03490 0.34 -0.2 746,346 + AO353_03490 0.34 -0.1 746,346 + AO353_03490 0.34 +0.2 746,346 + AO353_03490 0.34 -0.1 746,347 - AO353_03490 0.34 +2.2 746,347 - AO353_03490 0.34 -0.7 746,347 - AO353_03490 0.34 +1.1 746,347 - AO353_03490 0.34 +0.4 746,347 - AO353_03490 0.34 -1.7 746,347 - AO353_03490 0.34 -0.6 746,347 - AO353_03490 0.34 -0.4 746,347 - AO353_03490 0.34 -0.2 746,347 - AO353_03490 0.34 -0.6 746,347 - AO353_03490 0.34 +1.2 746,447 - AO353_03490 0.40 +0.9
Or see this region's nucleotide sequence