Strain Fitness in Shewanella loihica PV-4 around Shew_2408

Experiment: Phosphomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.24 mg/ml
2,824,960	-		Shew_2407	0.21	+0.9
2,825,288	-		Shew_2407	0.53	-0.6
2,825,449	-		Shew_2407	0.68	+0.4
2,825,576	-		Shew_2407	0.81	+0.2
2,825,629	+		Shew_2407	0.86	-0.1
2,826,037	+				-0.1
2,826,100	-				+0.9
2,826,216	-		Shew_2408	0.13	+0.6
2,826,373	-		Shew_2408	0.19	+1.9
2,826,383	-		Shew_2408	0.19	-0.9
2,826,700	+		Shew_2408	0.32	+0.2
2,826,706	-		Shew_2408	0.32	+0.2
2,826,719	-		Shew_2408	0.33	-0.4
2,826,816	-		Shew_2408	0.37	+0.2
2,826,852	-		Shew_2408	0.38	-4.0
2,826,980	+		Shew_2408	0.43	+0.8
2,827,054	-		Shew_2408	0.46	-0.6
2,827,079	+		Shew_2408	0.47	+0.3
2,827,087	-		Shew_2408	0.48	+1.9
2,827,459	-		Shew_2408	0.62	-0.3
2,827,549	-		Shew_2408	0.66	-0.0
2,827,683	+		Shew_2408	0.71	+1.1
2,827,683	+		Shew_2408	0.71	+2.2
2,828,001	-		Shew_2408	0.84	-0.5
2,828,001	-		Shew_2408	0.84	+1.9
2,828,085	+		Shew_2408	0.88	-3.1
2,828,303	-				-2.0
2,828,303	-				-2.2
2,828,445	+				-0.4
2,828,702	+				-0.9
2,828,744	+		Shew_2409	0.12	-1.7
2,829,277	-		Shew_2409	0.85	-2.0