Strain Fitness in Shewanella loihica PV-4 around Shew_2183
Experiment: Phosphomycin 0.24 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.24 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,542,304 | + | Shew_2182 | 0.32 | -0.5 | |
2,542,607 | + | Shew_2182 | 0.63 | -1.2 | |
2,542,907 | - | +1.6 | |||
2,542,920 | + | -0.9 | |||
2,543,522 | + | +0.7 | |||
2,543,522 | + | +0.9 | |||
2,543,522 | + | -0.4 | |||
2,543,522 | + | +0.2 | |||
2,543,530 | - | +0.2 | |||
2,543,530 | - | +0.6 | |||
2,543,591 | + | -1.5 | |||
2,543,597 | - | -2.7 | |||
2,543,599 | - | -1.9 | |||
2,543,631 | + | -1.6 | |||
2,543,733 | - | -1.9 | |||
2,543,943 | - | Shew_2184 | 0.41 | -3.4 | |
2,543,943 | - | Shew_2184 | 0.41 | -3.0 | |
2,544,294 | - | -1.9 | |||
2,544,398 | - | -0.3 | |||
2,544,527 | + | Shew_2185 | 0.21 | -2.9 |
Or see this region's nucleotide sequence