Strain Fitness in Shewanella loihica PV-4 around Shew_2074
Experiment: Phosphomycin 0.24 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.24 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,395,372 | - | -0.2 | |||
| 2,395,645 | + | Shew_2073 | 0.29 | -0.6 | |
| 2,396,651 | + | Shew_2074 | 0.26 | -0.3 | |
| 2,397,305 | + | Shew_2074 | 0.52 | +1.1 | |
| 2,397,317 | + | Shew_2074 | 0.53 | +0.9 | |
| 2,398,099 | - | Shew_2074 | 0.84 | +2.3 | |
| 2,398,161 | - | Shew_2074 | 0.86 | +2.7 | |
| 2,398,384 | + | +0.3 | |||
| 2,399,479 | + | -0.3 | |||
| 2,399,484 | + | +0.3 |
Or see this region's nucleotide sequence