Strain Fitness in Shewanella loihica PV-4 around Shew_1882
Experiment: Phosphomycin 0.24 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.24 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,164,944 | - | Shew_1880 | 0.35 | +0.7 | |
2,165,394 | + | -0.7 | |||
2,165,573 | + | Shew_1881 | 0.37 | -0.1 | |
2,166,006 | - | Shew_1882 | 0.14 | +0.7 | |
2,166,262 | - | Shew_1882 | 0.34 | +0.3 | |
2,166,446 | + | Shew_1882 | 0.48 | +1.5 | |
2,167,401 | - | +1.1 | |||
2,167,664 | + | Shew_1883 | 0.74 | -0.4 | |
2,167,708 | + | +0.2 | |||
2,167,967 | - | +0.7 | |||
2,168,097 | - | -0.5 | |||
2,168,111 | + | -1.4 |
Or see this region's nucleotide sequence