Strain Fitness in Shewanella loihica PV-4 around Shew_1864
Experiment: Phosphomycin 0.24 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phosphomycin 0.24 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,142,647 | - | +0.4 | |||
2,142,896 | + | Shew_1864 | 0.50 | -0.9 | |
2,143,003 | - | Shew_1864 | 0.71 | -1.5 | |
2,143,069 | + | Shew_1864 | 0.84 | -0.7 | |
2,143,820 | - | Shew_1865 | 0.35 | +0.8 | |
2,143,822 | + | Shew_1865 | 0.35 | +0.4 | |
2,143,895 | + | Shew_1865 | 0.40 | +1.1 | |
2,144,053 | - | Shew_1865 | 0.49 | -0.3 |
Or see this region's nucleotide sequence