Strain Fitness in Shewanella loihica PV-4 around Shew_1394

Experiment: Phosphomycin 0.24 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phosphomycin 0.24 mg/ml
1,601,011	+				-0.2
1,601,019	-				-1.1
1,601,204	+		Shew_1392	0.13	-0.4
1,601,505	+		Shew_1392	0.87	-0.1
1,601,513	-		Shew_1392	0.89	-0.6
1,601,513	-		Shew_1392	0.89	+0.6
1,601,585	+				+0.7
1,601,592	-				+0.6
1,601,854	+		Shew_1393	0.75	+0.6
1,602,194	-		Shew_1394	0.12	-0.9
1,602,289	-		Shew_1394	0.16	+0.5
1,602,835	+		Shew_1394	0.41	-2.3
1,603,188	+		Shew_1394	0.58	+0.6
1,603,583	-		Shew_1394	0.76	+0.4
1,603,796	-		Shew_1394	0.86	-0.5
1,603,821	-		Shew_1394	0.87	+0.5
1,603,838	+		Shew_1394	0.88	-2.3
1,603,841	-		Shew_1394	0.88	-0.1
1,603,974	+				-0.2
1,604,210	-				-0.5
1,604,210	-				-0.9
1,604,378	+		Shew_1395	0.12	-0.7
1,604,428	+		Shew_1395	0.18	-0.5
1,604,428	+		Shew_1395	0.18	-0.0
1,604,581	-		Shew_1395	0.38	-0.1
1,604,617	+		Shew_1395	0.43	-0.3